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Protein Alignment Mes2 and Hmr
DIOPT Version :9
Sequence 1: | NP_730768.1 |
Gene: | Mes2 / 40514 |
FlyBaseID: | FBgn0037207 |
Length: | 437 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_572637.2 |
Gene: | Hmr / 31988 |
FlyBaseID: | FBgn0001206 |
Length: | 1413 |
Species: | Drosophila melanogaster |
Alignment Length: | 152 |
Identity: | 36/152 - (23%) |
Similarity: | 64/152 - (42%) |
Gaps: | 35/152 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 VSGCLPTATHSLQDMSAAAAAIALDMKPKLEPHPLAAATAMPSQKIKKLVRRNASDKLKLIQMVH 68
||..:...|:.:.|..| |:|.:..| .|..:...:::...:::| ||.:|.
Fly 16 VSDTIGQKTNGVDDDKA--------------PNPFSRCT-YPGSRDGGILQTYRAERL-LIALVR 64
Fly 69 DNPILWDSRLPNFKG-AEEEKNRAWEHIGREFNAPGRRVARAFKSLRESYRRELAHVKLMGNGFK 132
..|:|:|:|.|.|:. |:.||. |:.|............|::.:||..|:| ||:.:.|
Fly 65 RQPLLYDARHPKFRDVAQREKQ--WKKIASRLATNATNCKRSWSALRYKYQR---HVRRLRN--- 121
Fly 133 PKWSLYEAMDFLRDVIRERKGA 154
|.|..|::.:.|
Fly 122 ----------FHRSAIQKDRAA 133
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Mes2 | NP_730768.1 |
MADF |
62..149 |
CDD:214738 |
24/87 (28%) |
Hmr | NP_572637.2 |
MADF_DNA_bdg |
59..149 |
CDD:287510 |
26/93 (28%) |
GT1 |
213..295 |
CDD:304916 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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