DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12768 and CG4404

DIOPT Version :9

Sequence 1:NP_001262229.1 Gene:CG12768 / 40513 FlyBaseID:FBgn0037206 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_572838.2 Gene:CG4404 / 32241 FlyBaseID:FBgn0030432 Length:308 Species:Drosophila melanogaster


Alignment Length:296 Identity:65/296 - (21%)
Similarity:110/296 - (37%) Gaps:49/296 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RLIELVRLNPILWDCRLPHY-KRSDKRKAIKWNELGRLFNVNGERVQRTFTSLREIFRRELNHEK 75
            |.::.|...|.||:...|.| |:.|.::|  |.::...........:..:.::|..|.|.|   |
  Fly    17 RFVQFVENQPCLWNYTHPGYSKKEDVQRA--WQQVANDIKDTVRNCRERWRTIRSSFLRSL---K 76

  Fly    76 MLGTTRFKSKWEYYDAMAFLKEVIRERKSRERIKH--GSLDSAPVATGSSNNNNNCVSRNSSNNN 138
            :..|...:.|.:|| ...:|:.::...|||...|.  |.:...|....::...:..|:.......
  Fly    77 LARTQTGRGKRKYY-LSKYLQFLVPFTKSRSCHKQLPGMVLRKPGQAATAQQEDEVVAAEEEAKV 140

  Fly   139 SSSAALDEYQYFAPSDPNNPNNQPQLQPEPKSSLPVTIPSL------SLTLSQLPVALQQQA--- 194
            |......:.|.   |:..:..||.|.:.:|.:.||:.:.|:      |....||...:.||:   
  Fly   141 SDGEMPLDVQV---SEEEHRRNQEQDREQPTACLPLRLHSIKVEHDSSNANQQLERMVSQQSLVS 202

  Fly   195 -------QHLQALQLQPDVTLTSLQKQSLPTSLTNATPAPLAQTSPAQVLSSSRSCSSSPSIYIK 252
                   .||.    ..|:|.......|....||..|..|.:...|.|..:|:.|..:.      
  Fly   203 VPAAALGNHLG----WSDLTQWFKGHGSGHHKLTTTTTTPTSPPPPPQPATSALSVFTG------ 257

  Fly   253 DEPCSPAGGCPEEVMTGNGPEATRKKLATIRPQTKQ 288
                .|.||       |:.|:|....|.::.|..|:
  Fly   258 ----GPGGG-------GSQPDADYSFLISLHPYIKE 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12768NP_001262229.1 MADF 12..100 CDD:214738 21/88 (24%)
CG4404NP_572838.2 MADF 17..103 CDD:214738 21/91 (23%)
BESS 267..301 CDD:281011 4/16 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438485
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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