DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12768 and CG4404

DIOPT Version :10

Sequence 1:NP_649431.1 Gene:CG12768 / 40513 FlyBaseID:FBgn0037206 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_572838.2 Gene:CG4404 / 32241 FlyBaseID:FBgn0030432 Length:308 Species:Drosophila melanogaster


Alignment Length:296 Identity:65/296 - (21%)
Similarity:110/296 - (37%) Gaps:49/296 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RLIELVRLNPILWDCRLPHY-KRSDKRKAIKWNELGRLFNVNGERVQRTFTSLREIFRRELNHEK 75
            |.::.|...|.||:...|.| |:.|.::|  |.::...........:..:.::|..|.|.|   |
  Fly    17 RFVQFVENQPCLWNYTHPGYSKKEDVQRA--WQQVANDIKDTVRNCRERWRTIRSSFLRSL---K 76

  Fly    76 MLGTTRFKSKWEYYDAMAFLKEVIRERKSRERIKH--GSLDSAPVATGSSNNNNNCVSRNSSNNN 138
            :..|...:.|.:|| ...:|:.::...|||...|.  |.:...|....::...:..|:.......
  Fly    77 LARTQTGRGKRKYY-LSKYLQFLVPFTKSRSCHKQLPGMVLRKPGQAATAQQEDEVVAAEEEAKV 140

  Fly   139 SSSAALDEYQYFAPSDPNNPNNQPQLQPEPKSSLPVTIPSL------SLTLSQLPVALQQQA--- 194
            |......:.|.   |:..:..||.|.:.:|.:.||:.:.|:      |....||...:.||:   
  Fly   141 SDGEMPLDVQV---SEEEHRRNQEQDREQPTACLPLRLHSIKVEHDSSNANQQLERMVSQQSLVS 202

  Fly   195 -------QHLQALQLQPDVTLTSLQKQSLPTSLTNATPAPLAQTSPAQVLSSSRSCSSSPSIYIK 252
                   .||.    ..|:|.......|....||..|..|.:...|.|..:|:.|..:.      
  Fly   203 VPAAALGNHLG----WSDLTQWFKGHGSGHHKLTTTTTTPTSPPPPPQPATSALSVFTG------ 257

  Fly   253 DEPCSPAGGCPEEVMTGNGPEATRKKLATIRPQTKQ 288
                .|.||       |:.|:|....|.::.|..|:
  Fly   258 ----GPGGG-------GSQPDADYSFLISLHPYIKE 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12768NP_649431.1 MADF 12..100 CDD:214738 21/88 (24%)
CG4404NP_572838.2 MADF 17..103 CDD:214738 21/91 (23%)
BESS 267..301 CDD:460758 4/16 (25%)

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