DRSC/TRiP Functional Genomics Resources

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Protein Alignment BoYb and DBP3

DIOPT Version :9

Sequence 1:NP_649430.1 Gene:BoYb / 40512 FlyBaseID:FBgn0037205 Length:1059 Species:Drosophila melanogaster
Sequence 2:NP_011437.3 Gene:DBP3 / 852802 SGDID:S000003046 Length:523 Species:Saccharomyces cerevisiae


Alignment Length:407 Identity:82/407 - (20%)
Similarity:152/407 - (37%) Gaps:96/407 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DSYSGQNANRPLVATNCSEYAVAHA-NCQLRPVRRF----------AEVSLLPDILETMRNLGLN 75
            |.|..:|           |.||..: :..|||:..|          ||:|..|            
Yeast    92 DEYFKEN-----------EIAVEDSLDLALRPLLSFDYLSLDSSIQAEISKFP------------ 133

  Fly    76 RLLRLQSYTWPHLAGGSGHGAMIVGSPASGRTFAYIPPVCHAVSRALMDFTGQCEDVEHDISQPD 140
            :...:|:..||:|.  ||...:.|....||:|||:..|.                 :.|.::...
Yeast   134 KPTPIQAVAWPYLL--SGKDVVGVAETGSGKTFAFGVPA-----------------ISHLMNDQK 179

  Fly   141 RYGPIALILVPDLRRVHQVSAMCLALLRKAH----------KNDSVTLALNVSSTKSSQFFLKLL 195
            :.|...|::.|......|:....:.|..|..          ..|...:.|     |.||      
Yeast   180 KRGIQVLVISPTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQL-----KKSQ------ 233

  Fly   196 NGVGCLVATPAQLVWFWQEAPGLMRFPCLQFLVYDDVDLMSREQL-QDVQQVLQEILPLSHSPQV 259
                .:||||.:|:...||  |.:....:.:||.|:.|.|..:.. :|::.:::|  ..:...|.
Yeast   234 ----VVVATPGRLLDLLQE--GSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRE--TDASKRQT 290

  Fly   260 VMVSKSYCHTLMSKLRAVNDKPALV-FGDILEAALYGGTRIR--ISIMRSEAKANAVVQMLQQ-- 319
            :|.:.::...:........:.|..| .|:..:  |....||.  :.::....|...::::|::  
Yeast   291 LMFTATWPKEVRELASTFMNNPIKVSIGNTDQ--LTANKRITQIVEVVDPRGKERKLLELLKKYH 353

  Fly   320 CSPEE-FRTVIFCSDDGDMQCLVAALEVQHYSCLPYYQTADLEVRQQVHSWQARSNGV--ILLCT 381
            ..|:: .:.:||.....:...:...|:...|:....:  .||..:|:..:.....:|.  :||.|
Yeast   354 SGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIH--GDLSQQQRTQALNEFKSGKSNLLLAT 416

  Fly   382 DNCPE-LDIRDAHTIIH 397
            |.... |||.:..|:|:
Yeast   417 DVAARGLDIPNVKTVIN 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BoYbNP_649430.1 P-loop_NTPase 81..263 CDD:304359 42/192 (22%)
DBP3NP_011437.3 SrmB 88..519 CDD:223587 82/407 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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