DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment BoYb and PRP5

DIOPT Version :9

Sequence 1:NP_649430.1 Gene:BoYb / 40512 FlyBaseID:FBgn0037205 Length:1059 Species:Drosophila melanogaster
Sequence 2:NP_009796.1 Gene:PRP5 / 852539 SGDID:S000000441 Length:849 Species:Saccharomyces cerevisiae


Alignment Length:685 Identity:130/685 - (18%)
Similarity:234/685 - (34%) Gaps:238/685 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 RPVRRFAEVSLLPDILETM-RNLGLNRLLRLQSYTWPHLAGGSGHGAMIVGSPASGRTFAYIPPV 114
            :||.:::::.|..|.:..: ..|....|..:||...|.:.  ||...:.:....||:|.:|:.|:
Yeast   252 KPVTKWSQLGLSTDTMVLITEKLHFGSLTPIQSQALPAIM--SGRDVIGISKTGSGKTISYLLPL 314

  Fly   115 CHAVSRALMDFTGQCEDVEHDISQPDRYGPIALILVPDLRRVHQVSAMCLALLRKAHK-NDSVTL 178
            ...|.            .:..:|:.:. ||:.|||.|       ...:.|.:..:..| .::.|.
Yeast   315 LRQVK------------AQRPLSKHET-GPMGLILAP-------TRELALQIHEEVTKFTEADTS 359

  Fly   179 ALNVSSTKSSQF---FLKLLNGVGCLVATPAQLVWFWQEAPGLMRFPCLQFLVYDDVDLMSREQL 240
            ..:|..|..|:.   ...|..|...:||||.:.:               ..|..:|..|:|.:::
Yeast   360 IRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFI---------------DILTLNDGKLLSTKRI 409

  Fly   241 QDVQQVLQE---ILPLSHSPQVVMVSKS---------YCHTLMSKLRA-------------VNDK 280
            ..|  |:.|   :..|...||:..:.|:         :..|..:|||:             :|.|
Yeast   410 TFV--VMDEADRLFDLGFEPQITQIMKTVRPDKQCVLFSATFPNKLRSFAVRVLHSPISITINSK 472

  Fly   281 PALVFGDILEAALYGGTRIRISIMRSE-AKANAVVQMLQQCSPEEF------------------- 325
                 |.:.|     ..:.:..|..|| .|.:.:||::.:.|  ||                   
Yeast   473 -----GMVNE-----NVKQKFRICHSEDEKFDNLVQLIHERS--EFFDEVQSENDGQSSDVEEVD 525

  Fly   326 -RTVIFCSDD-------------GDMQCLVAALEVQHYSCLPYYQ-TADLEVRQQVHSWQARSNG 375
             :.:||.|..             |.:.|.:.|.:       ||.: ..:||..:       |...
Yeast   526 AKAIIFVSSQNICDFISKKLLNAGIVTCAIHAGK-------PYQERLMNLEKFK-------REKN 576

  Fly   376 VILLCTD------NCPELDIRDAHTIIHHSM----------------SHSWSKFKLRHLKISDNL 418
            .|||||:      |.||:.:    .||::::                |.|.:...   |.:.|.|
Yeast   577 SILLCTEVLSRGLNVPEVSL----VIIYNAVKTFAQYVHTTGRTARGSRSGTAIT---LLLHDEL 634

  Fly   419 CNMVKPTASIVKKPL--YSLVLLDDNNHRQLPRLVDFLQLHQKVDHRLVEVAKRIRQELG----- 476
            ..     |.|:.|.:  ..:..||....::|.      ::..|.:..:.:...|:.:..|     
Yeast   635 SG-----AYILSKAMRDEEIKALDPLQAKELQ------EMSAKFESGMKKGKFRLSKGFGGKGLE 688

  Fly   477 --KARNDQHQLCDQILVLGKCYDPVCESRHRLSHIDRRPDYLPASGDVKVQLVKVYSPT--HFCV 537
              |::.::.|..|.                .|...|:|.|.|..         |:.:|.  |..|
Yeast   689 NIKSKREEAQNKDL----------------ELKKNDKRSDDLEK---------KISNPREGHDSV 728

  Fly   538 RLLEHLPPKGTWRMMEYSAVQEFRMQLTQIKEPRRYWPPVAGAICMYHTTFTKERVRVLKVAAIK 602
            .....|.|:..:.:.:.|                     ..|:|..|...:..:..::::..|.|
Yeast   729 SESSALIPRLNYELFKES---------------------TDGSIIFYAKVYINDLPQIVRWEATK 772

  Fly   603 NTNIVQSDLTVKLQALDVDTRIFSTNCGKLFECPE 637
            ||.:    |.:|     .:|....||.||.:  ||
Yeast   773 NTTL----LFIK-----HETGCSITNKGKFY--PE 796

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BoYbNP_649430.1 P-loop_NTPase 81..263 CDD:304359 40/188 (21%)
PRP5NP_009796.1 SrmB 227..731 CDD:223587 111/586 (19%)
DEADc_DDX46 244..468 CDD:350711 51/254 (20%)
KH-I_PRP5_like 749..837 CDD:411902 16/59 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0334
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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