DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment BoYb and ddx17

DIOPT Version :9

Sequence 1:NP_649430.1 Gene:BoYb / 40512 FlyBaseID:FBgn0037205 Length:1059 Species:Drosophila melanogaster
Sequence 2:NP_001313320.1 Gene:ddx17 / 556764 ZFINID:ZDB-GENE-030131-18 Length:671 Species:Danio rerio


Alignment Length:519 Identity:99/519 - (19%)
Similarity:189/519 - (36%) Gaps:82/519 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EKTWQSSRDSVYEVGDSYSGQNANRPLVATNCSEYAVAHANCQLRPVRRFAEVSLLPDILETMRN 71
            ||.:.:....|:.: ..|..:...|.      .|..|..:.|. :||..|.:......:::.:..
Zfish    56 EKNFYNENPEVHHM-SQYDVEEYRRK------REITVRGSGCP-KPVTNFHQAQFPQYVMDVLLQ 112

  Fly    72 LGLNRLLRLQSYTWPHLAGGSGHGAMIVGSPASGRTFAY-IPPVCHAVSRALMDFTGQCEDVEHD 135
            ........:|:..:|  ...||...:.:....||:|.|| :|.:.|               :.|.
Zfish   113 QNFKEPTAIQAQGFP--LALSGRDMVGIAQTGSGKTLAYLLPAIVH---------------INHQ 160

  Fly   136 --ISQPDRYGPIALILVPDLRRVHQVSAMCLALLRKAHKNDSVTLALNVSSTKSSQFFLKLLNGV 198
              :.:.|  |||.|:|.|......||..:.....:.:....:....   .:.|..| ...|..||
Zfish   161 PYLERGD--GPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYG---GAPKGPQ-IRDLERGV 219

  Fly   199 GCLVATPAQLVWFWQEAPGLMRFPCLQFLVYDDVDLMSREQLQ-DVQQVLQEILPLSHSPQVVMV 262
            ...:|||.:|:.|.:.....:| .| .:||.|:.|.|.....: .:::::.:|.|   ..|.:|.
Zfish   220 EICIATPGRLIDFLEVGKTNLR-RC-TYLVLDEADRMLDMGFEPQIRKIVDQIRP---DRQTLMW 279

  Fly   263 SKSYCHTLMSKLRA-----VNDKPALVFGDILEAALYGGTRIRISIMRSEAKANAVVQMLQQCSP 322
            |.    |...::|.     :.|...:..|.:..:|.:...:| :.:.....|.|.::|::::...
Zfish   280 SA----TWPKEVRQLAEDFLQDYVQINIGALELSANHNILQI-VDVCMENEKDNKLIQLMEEIMA 339

  Fly   323 E-EFRTVIFCSDDGDMQCLVAALEVQHYSCLPYYQTADLEVRQQVHSWQARSNGVILLCTDNCPE 386
            | |.:|:||.........|...:....:..:..:.......|..|.:........||:.||....
Zfish   340 EKENKTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASR 404

  Fly   387 -LDIRDAHTIIHHSMSHSWSKFKLRHLKISDNLCNMVKPTASIVKKPLYSLVLLDDNNHRQLPRL 450
             ||:.|...:|::...:|           |::..:.:..||....|.. :.......|.||...|
Zfish   405 GLDVEDVKFVINYDYPNS-----------SEDYVHRIGRTARSTNKGT-AYTFFTPGNLRQARDL 457

  Fly   451 VDFL-QLHQKVDHRLVEVAK--------RIRQELGKARNDQHQLCDQILVLGKCYDPVCESRHR 505
            |..| :..|.::.:|:::..        |:|.....:.::...|         .|...|:.|.|
Zfish   458 VRVLEEARQAINPKLLQLVDTGRGGGGGRMRYRGNNSSSNNPNL---------MYQDECDRRMR 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BoYbNP_649430.1 P-loop_NTPase 81..263 CDD:304359 42/185 (23%)
ddx17NP_001313320.1 SrmB 68..574 CDD:223587 96/507 (19%)
DEADc 97..302 CDD:238167 47/236 (20%)
HELICc 313..445 CDD:238034 25/144 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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