DRSC/TRiP Functional Genomics Resources

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Protein Alignment BoYb and CG6418

DIOPT Version :9

Sequence 1:NP_649430.1 Gene:BoYb / 40512 FlyBaseID:FBgn0037205 Length:1059 Species:Drosophila melanogaster
Sequence 2:NP_648413.1 Gene:CG6418 / 39218 FlyBaseID:FBgn0036104 Length:791 Species:Drosophila melanogaster


Alignment Length:461 Identity:106/461 - (22%)
Similarity:176/461 - (38%) Gaps:83/461 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 RPVRRFAEVSLLPDILETMRNLGLNRLLRLQSYTWPHLAGGSGHGAMIVGSPASGRTFAYI-PPV 114
            :||..|........:::.:|.....:...:|:...|  ...||...:.:....||:|.|:| |.:
  Fly   266 KPVTSFGHFGFDEQLIKAVRKAEYTQPTPIQAQAVP--TALSGRDIIGIAKTGSGKTAAFIWPML 328

  Fly   115 CHAVSRALMDFTGQCEDVEHDISQPDRYGPIALILVPDLRRVHQVSAMCLALLRKAHKNDSVTLA 179
            .|     :||        :..:...|  |||.|||.|       ...:.|.:..:|.|...| ..
  Fly   329 MH-----VMD--------QKQLKPGD--GPIGLILAP-------TRELSLQIYNEAKKFGKV-YN 370

  Fly   180 LNV-------SSTKSSQFFLKLLNGVGCLVATPAQLV-WFWQEAPGLMRFPCLQFLVYDDVDLMS 236
            |||       |..:.|:   .|..|...:||||.::: ....:|..|.|   :.|||.|:.|.|.
  Fly   371 LNVVCCYGGGSKWEQSK---ALEQGAEIIVATPGRMIDMVKMKATNLRR---VTFLVLDEADRMF 429

  Fly   237 REQLQ-DVQQVLQEILPLSHSPQVVMVSKSYCHTLMSKLRAV-NDKPALVFGDILEAALYGGTRI 299
            ....: .|:.:...:.|   ..|.:|.|.::...:....|.| :|...:|.||:.||    ...|
  Fly   430 HMGFEPQVRSICNHVRP---DRQCLMFSATFKKRIERLARDVLSDPVRIVQGDLNEA----NQDI 487

  Fly   300 RISIM---RSEAKAN----AVVQMLQQCSPEEFRTVIFCSDDGDMQCLVAALEVQHYSCLPYYQT 357
            ..|:.   ....|.|    .:|:.|.:.|     .:||.:...|.:.:...|.::.|:||..:..
  Fly   488 TQSVYVFPNPLQKWNWLLCHLVKFLSEGS-----VLIFVTKKVDAETVSNNLLIKEYNCLLLHGD 547

  Fly   358 ADLEVRQQVHSWQARSNGVILLCTDNCPE-LDIRDAHTIIHHSMSHSWSKFKLRHLKISDNLCNM 421
            .|...|.:|.:...|....||:.||.... |||.....::::..:..          |..:...:
  Fly   548 MDQADRNKVITQFKRKECDILVATDVAARGLDIPHIRNVVNYDTARD----------IETHTHRI 602

  Fly   422 VKPTASIVKKPLYSLVLLDDNNHRQLPRLVDFLQ-LHQKVDHRLVEVA--------KRIRQELGK 477
            .:...:..|...|:||  .|.:......||..|: ..|.|...|:|:|        .|.:|..||
  Fly   603 GRTGRAGEKGNAYTLV--TDKDKEFAGHLVRNLEGADQLVPDDLMELAMKSSWFRSSRFKQGKGK 665

  Fly   478 ARNDQH 483
            ...:.|
  Fly   666 RPTNTH 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BoYbNP_649430.1 P-loop_NTPase 81..263 CDD:304359 49/191 (26%)
CG6418NP_648413.1 DEADc 271..475 CDD:238167 55/237 (23%)
DEXDc 284..489 CDD:214692 60/242 (25%)
Helicase_C 504..609 CDD:278689 22/119 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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