DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment BoYb and ddx23

DIOPT Version :9

Sequence 1:NP_649430.1 Gene:BoYb / 40512 FlyBaseID:FBgn0037205 Length:1059 Species:Drosophila melanogaster
Sequence 2:NP_956176.1 Gene:ddx23 / 334283 ZFINID:ZDB-GENE-030131-6215 Length:807 Species:Danio rerio


Alignment Length:386 Identity:88/386 - (22%)
Similarity:156/386 - (40%) Gaps:68/386 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PVRRFAEVSLLPDILETMRNLGLNRLLRLQSYTWPHLAGGSGHGAMIVGSPASGRTFAYIPPVCH 116
            |:|.:.|.||.|.|||.:...|......:|....|  .|......:.|....||:|.|::.|:  
Zfish   376 PIRNWKEYSLPPHILEVIEKCGYKDPTPIQRQAIP--IGLQNRDIIGVAETGSGKTAAFLIPL-- 436

  Fly   117 AVSRALMDFTGQCEDVEHDISQPDRYGPIALILVPDLRRVHQVSAMCLALLRKAHKNDSV-TLAL 180
            .|....:....:.||.:.        ||.|:||.|......|:....:    |..|...: |:|:
Zfish   437 LVWITTLPKIDRIEDSDQ--------GPYAIILAPTRELAQQIEEETI----KFGKPLGIRTVAV 489

  Fly   181 NVSSTKSSQFFLKLLNGVGCLVATPAQLVWFWQEAPGLMRFPCLQ---FLVYDDVDLMSREQLQ- 241
            ....::..|.| :|..|...::|||.:|:...:.     |:..|.   ::|.|:.|.|.....: 
Zfish   490 IGGISREDQGF-RLRMGCEIVIATPGRLIDVLEN-----RYLVLSRCTYVVLDEADRMIDMGFEP 548

  Fly   242 DVQQVLQEILPLSH---------SPQVVMVS-----KSYCHTLM--------------SKLRAVN 278
            |||::| |.:|:::         .|:.:|.:     ..|..|:|              |.||   
Zfish   549 DVQKIL-EYIPVTNQKPDTDDAEDPEKMMQNFESGKHKYRQTVMFTATMPPAVERLARSYLR--- 609

  Fly   279 DKPALVFGDILEAALYGGTRI--RISIMRSEAKANAVVQMLQQCSPEEFRTVIFCSDDGDMQCLV 341
             :||:|:   :.:|.....|:  ::.:|....|...::::|  .|..|...:||.:.......|.
Zfish   610 -RPAVVY---IGSAGKPHERVEQKVILMSEGEKRKKLLEVL--ASGFEPPIIIFVNQKKGCDVLA 668

  Fly   342 AALEVQHYSCLPYYQTADLEVRQQVHSWQARSNGVILLCTDNCPE-LDIRDAHTIIHHSMS 401
            .:||...|:....:.....|.|:...|........||:.||.... :||:|...::::.|:
Zfish   669 KSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVLNYDMA 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BoYbNP_649430.1 P-loop_NTPase 81..263 CDD:304359 45/195 (23%)
ddx23NP_956176.1 DEADc 380..616 CDD:238167 62/265 (23%)
DEXDc 393..629 CDD:214692 57/265 (22%)
Helicase_C 637..746 CDD:278689 21/95 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.