DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment BoYb and ddx5

DIOPT Version :9

Sequence 1:NP_649430.1 Gene:BoYb / 40512 FlyBaseID:FBgn0037205 Length:1059 Species:Drosophila melanogaster
Sequence 2:NP_997777.2 Gene:ddx5 / 322206 ZFINID:ZDB-GENE-030131-925 Length:617 Species:Danio rerio


Alignment Length:475 Identity:94/475 - (19%)
Similarity:174/475 - (36%) Gaps:109/475 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 RPVRRFAEVSLLPDILETMRNLGLNRLLRLQSYTWPHLAGGSGHGAMIVGSPASGRTFAY-IPPV 114
            :|:.:|.|.:....:::.:..........:|:..||  ...||...:.:....||:|.:| :|.:
Zfish    93 KPIVKFHEANFPKYVMDVITKQNWTDPTPIQAQGWP--VALSGKDMVGIAQTGSGKTLSYLLPAI 155

  Fly   115 CHAVSRALMDFTGQCEDVEHDISQPDRYGPIALILVPDLRRVHQVSAMCLALLRKAHKNDSVTLA 179
            .|               :.|........|||.|:|.|......||..:. |...||.:..|.  .
Zfish   156 VH---------------INHQPFLEHGDGPICLVLAPTRELAQQVQQVA-AEYGKASRIKST--C 202

  Fly   180 LNVSSTKSSQFFLKLLNGVGCLVATPAQLVWFWQEAPGLMRFPCLQFLVYDDVDLMSREQLQDVQ 244
            :...:.|..| ...|..||...:|||.:|:.|.:.....:| .| .:||.|:.|.|         
Zfish   203 IYGGAPKGPQ-IRDLERGVEICIATPGRLIDFLEAGKTNLR-RC-TYLVLDEADRM--------- 255

  Fly   245 QVLQEILPLSHSPQVVMVSKSYCHTLMSKLRAVNDKPALVFG--------DILEAALYGGTRIRI 301
                  |.:...||:        ..::.::|.  |:..|::.        .:.|..|....:|.:
Zfish   256 ------LDMGFEPQI--------RKIVDQIRP--DRQTLMWSATWPKEVRQLAEDFLKEYIQINV 304

  Fly   302 SIMRSEAKANAVVQMLQQC-----------------SPEEFRTVIF------CSDDGDMQCLVAA 343
            ..::..|..| ::|::..|                 |.:|.:|:||      |.|      |...
Zfish   305 GALQLSANHN-ILQIVDVCNDGEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDD------LTRR 362

  Fly   344 LEVQHYSCLPYYQTADLEVRQQVHSWQARSNGVILLCTDNCPE-LDIRDAHTIIHHSMSHSWSKF 407
            :....:..:..:...:.:.|..|.:........||:.||.... ||:.|...:|:....::    
Zfish   363 MRRDGWPAMGIHGDKNQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKFVINFDYPNN---- 423

  Fly   408 KLRHLKISDNLCNMVKPTASIVKKPLYSLVLLDDNNHRQLPRLVDFL-QLHQKVDHRLVEVAK-- 469
                   |::..:.:..||. .:|...:......||.:|...||..| :.:|.::.:|:::|:  
Zfish   424 -------SEDYIHRIGRTAR-SQKTGTAYTFFTPNNMKQAHDLVSVLREANQAINPKLIQMAEDR 480

  Fly   470 --RIRQELGKA----RNDQH 483
              |.|...|..    |.|:|
Zfish   481 GGRSRGGRGGGYRDDRRDRH 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BoYbNP_649430.1 P-loop_NTPase 81..263 CDD:304359 44/182 (24%)
ddx5NP_997777.2 PRK01297 25..446 CDD:234938 79/419 (19%)
DEADc 98..303 CDD:238167 51/252 (20%)
HELICc 314..446 CDD:238034 25/150 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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