DRSC/TRiP Functional Genomics Resources

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Protein Alignment BoYb and prp11

DIOPT Version :9

Sequence 1:NP_649430.1 Gene:BoYb / 40512 FlyBaseID:FBgn0037205 Length:1059 Species:Drosophila melanogaster
Sequence 2:NP_587856.1 Gene:prp11 / 2538936 PomBaseID:SPCC10H11.01 Length:1014 Species:Schizosaccharomyces pombe


Alignment Length:391 Identity:73/391 - (18%)
Similarity:136/391 - (34%) Gaps:105/391 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 RPVRRFAEVSLLPDILETMRNLGLNRLLRLQSYTWPHLAGGSGHGAMIVGSPASGRTFAYIPPVC 115
            :||..:::..|....:..:.:||..:...:|:...|.:.  ||...:.|....||:|.|::.|:.
pombe   415 KPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAIT--SGRDVIGVAKTGSGKTIAFLLPMF 477

  Fly   116 HAVSRALMDFTGQCEDVEHDISQPDRYGPIALILVPDLRRVHQVSAMCLALLRKAHKNDSVTLAL 180
            ..:.......||:              ||||:|:.|                         |..|
pombe   478 RHIKDQRPLKTGE--------------GPIAIIMTP-------------------------TREL 503

  Fly   181 NVSSTKSSQFFLKLLN---------------------GVGCLVATPAQLVWFWQEAPG-LMRFPC 223
            .|...:..:.||||||                     |...:|.||.:::.......| :.....
pombe   504 AVQIFRECKPFLKLLNIRACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHR 568

  Fly   224 LQFLVYDDVDLMSREQLQ-DVQQVLQEILPLSHSPQVVMVSKSYCHTLMSKLRAVNDKPALVFGD 287
            ..:||.|:.|.|.....: .|.:::..|.|   ..|.|:.|.::...:.:..|.|..||..:   
pombe   569 CTYLVLDEADRMFDLGFEPQVMRIINNIRP---DRQTVLFSATFPRAMEALARKVLKKPVEI--- 627

  Fly   288 ILEAALYGGTRIRISIMRSEAKANAVVQMLQQCSPEE-------------------FRTVIFCSD 333
                 ..||.    |::.||      |:.:.:..|||                   .||::|...
pombe   628 -----TVGGR----SVVASE------VEQIVEVRPEESKFSRLLELLGELYNNQLDVRTLVFVDR 677

  Fly   334 DGDMQCLVAALEVQHYSCLPYYQTADLEVRQQ-VHSWQARSNGVILLCTDNCPELDIRDAHTIIH 397
            ......|::.|..:.|:....:...|...|.. :..::|....|::..:.....||::....:::
pombe   678 QESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVN 742

  Fly   398 H 398
            :
pombe   743 Y 743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BoYbNP_649430.1 P-loop_NTPase 81..263 CDD:304359 42/204 (21%)
prp11NP_587856.1 SrmB 395..868 CDD:223587 73/391 (19%)
DEADc 420..628 CDD:238167 50/259 (19%)
Helicase_C 649..763 CDD:278689 13/95 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0334
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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