DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment BoYb and Ddx46

DIOPT Version :9

Sequence 1:NP_649430.1 Gene:BoYb / 40512 FlyBaseID:FBgn0037205 Length:1059 Species:Drosophila melanogaster
Sequence 2:NP_001268984.1 Gene:Ddx46 / 212880 MGIID:1920895 Length:1032 Species:Mus musculus


Alignment Length:380 Identity:75/380 - (19%)
Similarity:155/380 - (40%) Gaps:68/380 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 RPVRRFAEVSLLPDILETMRNLGLNRLLRLQSYTWPHLAGGSGHGAMIVGSPASGRTFAYIPPVC 115
            :|::.:.:..:...||.:::..|..:...:|:...|.:.  ||...:.:....||:|.|::.|  
Mouse   369 KPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIM--SGRDLIGIAKTGSGKTIAFLLP-- 429

  Fly   116 HAVSRALMDFTGQCEDVEHDISQPDRYGPIALILVPDLRRVHQVSAMCLALLRKAHKNDSVTLAL 180
              :.|.:||        :..:.:.:  ||||:|:.|......|::..|        |..|.||.|
Mouse   430 --MFRHIMD--------QRSLEEGE--GPIAVIMTPTRELALQITKEC--------KKFSKTLGL 474

  Fly   181 NV----SSTKSSQFFLKLLNGVGCLVATPAQLVWFWQEAPG----LMRFPCLQFLVYDDVDLMSR 237
            .|    ..|..|:...:|..|...:|.||.:::.......|    |.|   :.::|.|:.|.|..
Mouse   475 RVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRR---VTYVVLDEADRMFD 536

  Fly   238 EQLQ-DVQQVLQEILPLSHSPQVVMVSKSYCHTLMSKLRAVNDKP--------ALVFGDILEAAL 293
            ...: .|.:::..:.|   ..|.||.|.::...:.:..|.:..||        ::|..|:.:   
Mouse   537 MGFEPQVMRIVDNVRP---DRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQ--- 595

  Fly   294 YGGTRIRISIMRSEAKANAVVQMLQQCSPEEFRTVIFCSD-----DGDMQCLVAALEVQHYSCLP 353
                  ::.::..|.|...::::|...  :|..:||...|     ||.::.|:.|    .|.|:.
Mouse   596 ------QVIVIEEEKKFLKLLELLGHY--QESGSVIIFVDKQEHADGLLKDLMRA----SYPCMS 648

  Fly   354 YYQTADLEVRQQVHSWQARSNGVILLCTDNCPE-LDIRDAHTIIHHSMSHSWSKF 407
            .:...|...|..:.:........:|:.|..... ||::....::::|..:.:..:
Mouse   649 LHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDY 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BoYbNP_649430.1 P-loop_NTPase 81..263 CDD:304359 45/190 (24%)
Ddx46NP_001268984.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..227
SrmB 344..826 CDD:223587 75/380 (20%)
Q motif 372..400 3/27 (11%)
DEADc 378..581 CDD:238167 52/232 (22%)
DEAD box 529..532 1/2 (50%)
Helicase_C 618..714 CDD:278689 17/90 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0334
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.