DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment BoYb and laf-1

DIOPT Version :9

Sequence 1:NP_649430.1 Gene:BoYb / 40512 FlyBaseID:FBgn0037205 Length:1059 Species:Drosophila melanogaster
Sequence 2:NP_001254859.1 Gene:laf-1 / 190611 WormBaseID:WBGene00002244 Length:708 Species:Caenorhabditis elegans


Alignment Length:360 Identity:81/360 - (22%)
Similarity:149/360 - (41%) Gaps:49/360 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 WQS--SRDSVYEVGDSYSGQNANRPLVATNCSEY----AVAHANCQLRPVRRFAEVSLLPDILET 68
            |::  :||...| .:.:|||     |...|..:|    ..|..:...:|:..|:::||...|.|.
 Worm   187 WENRGARDERIE-QELFSGQ-----LSGINFDKYEEIPVEATGDDVPQPISLFSDLSLHEWIEEN 245

  Fly    69 MRNLGLNRLLRLQSYTWPHLAGGSGHGAMIVGSPASGRTFAYIPPVCHAVSRALMDFTGQCEDVE 133
            ::..|.:|...:|.|:.|.|.|  |...|......||:|.|::.|:.:|:.:...|...:  .|.
 Worm   246 IKTAGYDRPTPVQKYSIPALQG--GRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHR--SVT 306

  Fly   134 HDISQPDRYGPIALILVPDLRRVHQVSAMCLALLRKAHKNDSVTLALNVSSTKSSQFFLKLLNGV 198
            ....:..:| |.||:|.|    ..::|.......||......:|.||.....::.:..:..|. :
 Worm   307 SSGGRKKQY-PSALVLSP----TRELSLQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLR-L 365

  Fly   199 GC--LVATPAQLVWFWQEAPGLMRFPCLQFLVYDDVDLMSREQLQDVQQVLQEILPLSHSPQVVM 261
            ||  |:|||.:|:....:  ||:.....::||.|:.|.|               |.:...||:..
 Worm   366 GCHILIATPGRLIDVMDQ--GLIGMEGCRYLVLDEADRM---------------LDMGFEPQIRQ 413

  Fly   262 VSKSYCHTLMSKLRAVNDKPALVFG---DILEAALYGGTRIRISIMRSEAKANAVVQMLQQCSPE 323
            :.:  |:.:.||...:....:..|.   .:|.........:.:::.|..:.:..::|.:.....:
 Worm   414 IVE--CNRMPSKEERITAMFSATFPKEIQLLAQDFLKENYVFLAVGRVGSTSENIMQKIVWVEED 476

  Fly   324 EFRTVIFCSDD--GDMQCLVAALEVQH-YSCLPYY 355
            |.|:.:....|  ||....:..:|.:. .|.|.||
 Worm   477 EKRSYLMDLLDATGDSSLTLVFVETKRGASDLAYY 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BoYbNP_649430.1 P-loop_NTPase 81..263 CDD:304359 45/183 (25%)
laf-1NP_001254859.1 PTZ00424 219..622 CDD:185609 71/322 (22%)
DEADc 233..455 CDD:238167 57/250 (23%)
Helicase_C 476..587 CDD:278689 10/36 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.