DRSC/TRiP Functional Genomics Resources

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Protein Alignment BoYb and ddx-46

DIOPT Version :9

Sequence 1:NP_649430.1 Gene:BoYb / 40512 FlyBaseID:FBgn0037205 Length:1059 Species:Drosophila melanogaster
Sequence 2:NP_001033411.1 Gene:ddx-46 / 176943 WormBaseID:WBGene00018776 Length:970 Species:Caenorhabditis elegans


Alignment Length:383 Identity:79/383 - (20%)
Similarity:152/383 - (39%) Gaps:73/383 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 RPVRRFAEVSLLPDILETMRNLGLNRLLRLQSYTWPHLAGGSGHGAMIVGSPASGRTFAYIPPVC 115
            :|::.:|:..:...::..::....::...:|:...|.:.  ||...:.:....||:|.|::.|: 
 Worm   301 KPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIM--SGRDVIGIAKTGSGKTLAFLLPM- 362

  Fly   116 HAVSRALMDFTGQCEDVEHDISQPDRY---GPIALILVPDLRRVHQVSAMCLALLRKAHKNDSVT 177
                            ..|.:.||:..   ||||:||.|       ...:.:...::|:| .:..
 Worm   363 ----------------FRHILDQPELEEGDGPIAVILAP-------TRELAMQTYKEANK-FAKP 403

  Fly   178 LALNVSSTKS----SQFFLKLLNGVGCLVATPAQLVWFWQEAPG----LMRFPCLQFLVYDDVDL 234
            |.|.|:.|..    |:....|..|...:|.||.:::.......|    |.|   :.:||.|:.|.
 Worm   404 LGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRR---VTYLVLDEADR 465

  Fly   235 MSREQLQ-DVQQVLQEILPLSHSPQVVMVSKSYCHTLMSKLRAVNDKPALVFGDILEAALYGGTR 298
            |..:..: .:.:|:..|.|   ..|.|:.|.::...:.:..|.|.|||..:        |.||. 
 Worm   466 MFDKGFEPQIMKVVNNIRP---DKQTVLFSATFPRHMEALARKVLDKPVEI--------LVGGK- 518

  Fly   299 IRISIMRSEAKANAVV--------QMLQQCSP--EEFRTVIFCSDDGDMQCLVAALEVQHY-SCL 352
               |::.|:...|||:        ::|:....  ||..:::|.........:|..|....| |..
 Worm   519 ---SVVCSDITQNAVICAEHQKFLKLLELLGMYYEEGSSIVFVDKQEKADDIVDQLMRTGYNSVA 580

  Fly   353 PYYQTADLEVRQQVHSWQARSNGVI--LLCTDNCPE-LDIRDAHTIIHHSMSHSWSKF 407
            |.:...|...|..  |......|||  |:.|..... ||:::...::::...:.:..:
 Worm   581 PLHGGIDQHDRDS--SIADFKTGVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDY 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BoYbNP_649430.1 P-loop_NTPase 81..263 CDD:304359 44/193 (23%)
ddx-46NP_001033411.1 SrmB 276..793 CDD:223587 79/383 (21%)
DEADc 316..514 CDD:238167 50/238 (21%)
HELICc 534..655 CDD:238034 19/105 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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