DRSC/TRiP Functional Genomics Resources

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Protein Alignment slif and mmuP

DIOPT Version :10

Sequence 1:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_414794.4 Gene:mmuP / 946284 ECOCYCID:G6135 Length:467 Species:Escherichia coli


Alignment Length:577 Identity:118/577 - (20%)
Similarity:202/577 - (35%) Gaps:148/577 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LARVLNLFDLTALGVGSTLGLGVYVLAGQVAFNIAGPAVTISFLIAAIASAFAGICYAEFAARVP 87
            |.|.:....|..|.:|..:|.|::...|.:..........:::||.|:.......|..|.:..:|
E. coli    10 LKRTMKTRHLIMLSLGGVIGTGLFFNTGYIISTTGAAGTLLAYLIGALVVWLVMQCLGELSVAMP 74

  Fly    88 KAGSAYVYSYVTIGEFVAFTIGWNLILEYVI--GTASVARGL-SGYFDSLINNNMSKALNESMHI 149
            :.|:.:||:...:|....:|:.|...|.:.:  |::..|.|. ..|:                  
E. coli    75 ETGAFHVYAARYLGPATGYTVAWLYWLTWTVALGSSFTAAGFCMQYW------------------ 121

  Fly   150 DVDFLGDYPDFLSFGMVLLLAAILAFGAK--------ESSFLNNIFTTVNLVT-IAIVLVAGAMN 205
                   :|....:...::..||: ||..        |..|.   |:.|.:|| ||.:::.||..
E. coli   122 -------FPQVPVWVWCVVFCAII-FGLNVISTRFFAEGEFW---FSLVKVVTIIAFIILGGAAI 175

  Fly   206 ANVDNWRIPKKDVPEGFGTG-----GFMPFGIAGVMAGAAKCFYGFVGFDCIATTGEEAINPKRN 265
            ...    ||.:|.....|..     |:.|.|...::.......:.|.|.:.|.....|..||::.
E. coli   176 FGF----IPMQDGSPAPGLSNITAEGWFPHGGLPILMTMVAVNFAFSGTELIGIAAGETENPRKV 236

  Fly   266 IPLSIVVSLIIIFLSYFGVSTVLTMMLPYYKQD-KDAPFPHAFDSVEWYTIKWIVTIGAVFALCT 329
            ||::|..::..:.:.:.|...||..::|..:.. :.:||...|:.|   .|.:...| ..|.:.|
E. coli   237 IPVAIRTTIARLIIFFIGTVFVLAALIPMQQVGVEKSPFVLVFEKV---GIPYAADI-FNFVILT 297

  Fly   330 SLLGA----MFPLPRILYAMGKDGIL---FKRLSTVNSYTKTPLLATIVSGIFASIMAMLFNLDQ 387
            ::|.|    ::...|:|:::..:..|   |.|: |.|....|.|..:::.|:.|     ||:   
E. coli   298 AILSAANSGLYASGRMLWSLSNERTLPACFARV-TKNGVPLTALSVSMLGGVLA-----LFS--- 353

  Fly   388 LVDMMSIGTLLAYTIVAICVLVLRYQDEEMTKLVSVKAPNVFRQFFNGNSFREPNSMTSSITKVG 452
                                              ||.||:                 |..:....
E. coli   354 ----------------------------------SVVAPD-----------------TVFVALSA 367

  Fly   453 IVVFAIFCLVW---CSLQKVFDLDSTGGIVALSLVGAVLILICVVIGMQPVSTIELTFKVPLVPF 514
            |..||:.. ||   |:...||.........|||                     ||.::.|..|.
E. coli   368 ISGFAVVA-VWLSICASHFVFRRRHLQQGKALS---------------------ELHYRAPWYPL 410

  Fly   515 VPCLSVFANLYLMFQLDLNTWIRFLIWIVIGYVIYFCYGMRNSTQISRSRSHAEVAA 571
            ||.|.....|.....|..:...|..:|..:.:|. .|||....||...::...|..|
E. coli   411 VPVLGFVLCLVACVGLAFDPAQRIALWCGLPFVA-LCYGAYFLTQPRNAKQEPEHVA 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slifNP_649428.1 2A0303 8..557 CDD:273330 114/561 (20%)
mmuPNP_414794.4 PRK11387 1..467 CDD:236904 118/577 (20%)

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