DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slif and CAN1

DIOPT Version :9

Sequence 1:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_010851.1 Gene:CAN1 / 856646 SGDID:S000000789 Length:590 Species:Saccharomyces cerevisiae


Alignment Length:569 Identity:120/569 - (21%)
Similarity:200/569 - (35%) Gaps:187/569 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DVNEGESQLARV---LNLFDLTALGVGSTLGLGVYVLAGQVAFNIAGP-AVTISFLIAAIASAFA 75
            |.:|||.|.|.|   |....:..:.:|.|:|.|:::.......| ||| ...||:|.....:...
Yeast    73 DEDEGEVQNAEVKRELKQRHIGMIALGGTIGTGLFIGLSTPLTN-AGPVGALISYLFMGSLAYSV 136

  Fly    76 GICYAEFAARVPKAGSAYVYSYVTIGEFVAFTIGWNLILEYVIGTASVARGLSGYFDSLINNNMS 140
            .....|.|..:|...|..|:|.    .|::...|             .|.|...:|        |
Yeast   137 TQSLGEMATFIPVTSSFTVFSQ----RFLSPAFG-------------AANGYMYWF--------S 176

  Fly   141 KALNESMHIDVDFLGDYPDFLSFGMVLLLAAILAFGAKESSFLNNIFTTVNL------------- 192
            .|:..::.:.|  :|....|.:: .|.|.|.|..|..        |.|.:||             
Yeast   177 WAITFALELSV--VGQVIQFWTY-KVPLAAWISIFWV--------IITIMNLFPVKYYGEFEFWV 230

  Fly   193 VTIAIVLVAGAM--------NANVDN------WRIP--------KKDVPEGFGTGGFMPFGIAGV 235
            .:|.::.:.|.:        .|.|..      ||.|        .||..||         ...|.
Yeast   231 ASIKVLAIIGFLIYCFCMVCGAGVTGPVGFRYWRNPGAWGPGIISKDKNEG---------RFLGW 286

  Fly   236 MAGAAKCFYGFVGFDCIATTGEEAINPKRNIPLSI--VVSLIIIFLSYFGVSTVLTMMLPYYKQD 298
            ::......:.|.|.:.:..|..||.||::::|.:|  ||..|:.|  |.|....:.:::||....
Yeast   287 VSSLINAAFTFQGTELVGITAGEAANPRKSVPRAIKKVVFRILTF--YIGSLLFIGLLVPYNDPK 349

  Fly   299 --------KDAPF------------PHAFDSVEWYTIKWIVTIGAVFALCTSLLGA----MFPLP 339
                    ..:||            ||.|::|                :.|:::.|    ::...
Yeast   350 LTQSTSYVSTSPFIIAIENSGTKVLPHIFNAV----------------ILTTIISAANSNIYVGS 398

  Fly   340 RILYAMGKDGILFKRLSTVNSYTK--TPLLATIVSGIFASIMAMLFN------LDQLVDMMSIGT 396
            |||:.:.|:.:..|.||..   ||  .|.:|..|:..|.::..|..:      .:.|:::..:..
Yeast   399 RILFGLSKNKLAPKFLSRT---TKGGVPYIAVFVTAAFGALAYMETSTGGDKVFEWLLNITGVAG 460

  Fly   397 LLAYTIVAIC----VLVLRY----QDE-----------------EMTKLVSVKAPNVFRQFFNGN 436
            ..|:..::|.    :..|:|    :||                 .||.::.::....|...|||.
Yeast   461 FFAWLFISISHIRFMQALKYRGISRDELPFKAKLMPGLAYYAATFMTIIIIIQGFTAFAPKFNGV 525

  Fly   437 SFREPNSMTSSITKVGIVVFAIFCLVWCSLQKVF-----------DLDS 474
            ||          ....|.:| :|..||...|.:|           |:||
Yeast   526 SF----------AAAYISIF-LFLAVWILFQCIFRCRFIWKIGDVDIDS 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slifNP_649428.1 2A0303 8..557 CDD:273330 120/569 (21%)
AA_permease_C 507..557 CDD:290617
CAN1NP_010851.1 2A0310 85..562 CDD:273334 111/554 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345709
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 90 1.000 Inparanoid score I1545
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.890

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