DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slif and DIP5

DIOPT Version :9

Sequence 1:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_015058.1 Gene:DIP5 / 855863 SGDID:S000006186 Length:608 Species:Saccharomyces cerevisiae


Alignment Length:549 Identity:110/549 - (20%)
Similarity:200/549 - (36%) Gaps:163/549 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DVNEGESQLARVLNLFDLTALGVGSTLGLGVYVLAGQVAFNIAGPAVTISFLIAAIASAFAGI-- 77
            |..:..::|.:.|....::.:.:|.:||.|:.:..| .|....||...:      ||.||.|:  
Yeast    74 DGKDENTRLRKDLKARHISMIAIGGSLGTGLLIGTG-TALLTGGPVAML------IAYAFVGLLV 131

  Fly    78 -----CYAEFAARVPKAG-SAYVYSYVTIGEFVAFTIGWNLILEYVI---GTASVARGLSGYFDS 133
                 |..|.|:.:|..| ::|...||  ...:.|.||:..:.:|.|   ...:.|..:..|:.|
Yeast   132 FYTMACLGEMASYIPLDGFTSYASRYV--DPALGFAIGYTYLFKYFILPPNQLTAAALVIQYWIS 194

  Fly   134 LINNN----------MSKALNESMHIDVDFLGDYPDFL-SFGMVLLLAAILAFGAKESSFLNNIF 187
            ....|          :..|:|.   :.|.|.|::..:| ||.::::|..||              
Yeast   195 RDRVNPGVWITIFLVVIVAINV---VGVKFFGEFEFWLSSFKVMVMLGLIL-------------- 242

  Fly   188 TTVNLVTIAIVLVAGAMN---ANVDNWRIPKKDVPEGFGTGGFMPFGIAGVMAGAAK-------- 241
                  .:.|:::.|..|   .....||.|          |.|..:..| :..|..|        
Yeast   243 ------LLFIIMLGGGPNHDRLGFRYWRDP----------GAFKEYSTA-ITGGKGKFVSFVAVF 290

  Fly   242 --CFYGFVGFDCIATTGEEAINPKRNIPLSIVVSLIIIFLSYFGVSTVLTMMLPY------YKQD 298
              ..:.:.|.:.......||.||::::|.:|.:::..|.:.|.....:|.|.:.|      ..:.
Yeast   291 VYSLFSYTGIELTGIVCSEAENPRKSVPKAIKLTVYRIIVFYLCTVFLLGMCVAYNDPRLLSTKG 355

  Fly   299 KD-----APF------------PHAFDSVEWYTIKWIVTIGAVFALCTSLLGAMFPLPRILYAMG 346
            |.     :||            ||.|::         ..:..||:.|.|   .::...|.|||:.
Yeast   356 KSMSAAASPFVVAIQNSGIEVLPHIFNA---------CVLVFVFSACNS---DLYVSSRNLYALA 408

  Fly   347 KDGILFKRLSTVNSYTKT-----PLLATIVSGIFASI--------MAMLFNLDQLVDMMSIGTLL 398
            .||      .....:.||     |..|.|:|.:|..:        .|.:||  ..|:::|:..:|
Yeast   409 IDG------KAPKIFAKTSRWGVPYNALILSVLFCGLAYMNVSSGSAKIFN--YFVNVVSMFGIL 465

  Fly   399 AYTIVAICVL----VLRYQDEEMTKLVSVKAPN----------------VFRQF--FNGNSFREP 441
            ::..:.|..:    ..|.|..:.:|...| ||.                :.:.|  |.|:.|...
Yeast   466 SWITILIVYIYFDKACRAQGIDKSKFAYV-APGQRYGAYFALFFCILIALIKNFTVFLGHKFDYK 529

  Fly   442 NSMTSSITKVGIVVFAIFCLVWCSLQKVF 470
            ..:|      |.:...::.:.|...:.::
Yeast   530 TFIT------GYIGLPVYIISWAGYKLIY 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slifNP_649428.1 2A0303 8..557 CDD:273330 110/549 (20%)
AA_permease_C 507..557 CDD:290617
DIP5NP_015058.1 2A0310 83..566 CDD:273334 108/540 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 90 1.000 Inparanoid score I1545
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.950

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