DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slif and BAP2

DIOPT Version :9

Sequence 1:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_009624.4 Gene:BAP2 / 852360 SGDID:S000000272 Length:609 Species:Saccharomyces cerevisiae


Alignment Length:636 Identity:128/636 - (20%)
Similarity:209/636 - (32%) Gaps:239/636 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TRRK-----TEDVNEG------ESQLARVLNLFDLTALGVGSTLGLGVYVLAGQVAFNIAGP-AV 61
            ||.|     |.|:.:|      :|:|.:.:....:..:.:|:.:|.|:.| |.....:..|| |:
Yeast    66 TRTKQINENTSDLEDGVESITSDSKLKKSMKSRHVVMMSLGTGIGTGLLV-ANAKGLHYGGPAAL 129

  Fly    62 TISFLIAAIASAFAGICYAEFAARVPKAGSAY-VYSYVTIGEFVAFT------IGWNLILEYVIG 119
            .|.:::.:..:.|......|.|...|...:.: .||.:.|.:...|.      ..|..:|...:.
Yeast   130 IIGYILVSFVTYFMIQAAGEMAVTYPTLPANFNAYSSIFISKSFGFATVWLYCFQWLTVLPLELI 194

  Fly   120 TASVARGLSGYFDSLINNNMSKALNESMHIDVDFLGD--YPDFLSFGMVLLLAAILAFGAK---E 179
            |||:.                          :.|..|  .||.......:.|..|..||.|   |
Yeast   195 TASMT--------------------------IQFWNDKINPDIYILIFYVFLVFIHFFGVKAYGE 233

  Fly   180 SSFLNN---IFTTVNLVTIAIVLVAGAMNANVDNWRIPKKDVPEGFGTGGFM-------PFGIAG 234
            :.|:.|   |......:.::||:..|                  |.|..|::       |...||
Yeast   234 TEFIFNCCKILMIAGFIILSIVINCG------------------GAGNDGYIGATYWHNPGAFAG 280

  Fly   235 -VMAGAAK--------CFYGFVGFDCIATTGEEAINPKRNIPLSI---VVSLIIIFLSYFGVSTV 287
             ...|..|        .::.|.|.:..|.:.:|..||:::.|::.   :..:::|:|        
Yeast   281 DTSIGRFKNVCYILVTAYFSFGGMELFALSVQEQSNPRKSTPVAAKRSIYRIVVIYL-------- 337

  Fly   288 LTMML-----PYYKQDK----------DAPF------------PHAFDSVEWYTIKWIVTIGAVF 325
            |||:|     | |..|:          .:|:            ||..::|        :.|..|.
Yeast   338 LTMILIGFNVP-YNDDQLMGAGGSATHASPYVLAASIHGVKIVPHIINAV--------ILISVVS 393

  Fly   326 ALCTSLLGAMFPLPRILYAMGKDGILFKRLSTVNSYTKTPLLATIVSGIFASI------------ 378
            ...:||...    ||::.::.:.|...|.|..|:...: ||.|.||..:|..|            
Yeast   394 VANSSLYAG----PRLICSLAQQGYAPKFLDYVDREGR-PLRALIVCCVFGVIAFVAASSKEEIV 453

  Fly   379 ---MAMLFNLDQLVDMMSIGTLLAYTIVAICVLVLRYQDEEMTKLVSVKAPNVFRQFF--NGNSF 438
               :|.:..|.:|           :|..:|.:..||                 |||..  .|.|.
Yeast   454 FTWLAAIAGLSEL-----------FTWTSIMLSHLR-----------------FRQAMKVQGRSL 490

  Fly   439 REPNSMTSSITKVGIVVFAIFCLVWCSLQKVFDLDSTGGIVALSLVGAVLILICVVIGMQPVSTI 503
            .|.....::    ||         |.|:..||                ..||:.|.         
Yeast   491 DELGYKATT----GI---------WGSIYGVF----------------FNILVFVA--------- 517

  Fly   504 ELTFKVPLVPF-----VPCLSVFANLYLMFQLDLNTWIRFLIWIVIGYVIY 549
              .|.|.|.|.     ....|.|.| ||.|.:    |:.|    ..||::|
Yeast   518 --QFWVALAPLGNGGKCDAESFFQN-YLAFPI----WLAF----YFGYMVY 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slifNP_649428.1 2A0303 8..557 CDD:273330 128/636 (20%)
AA_permease_C 507..557 CDD:290617 15/48 (31%)
BAP2NP_009624.4 2A0310 92..573 CDD:273334 120/610 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345675
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 90 1.000 Inparanoid score I1545
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.800

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