DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slif and AGP1

DIOPT Version :9

Sequence 1:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_009905.3 Gene:AGP1 / 850333 SGDID:S000000530 Length:633 Species:Saccharomyces cerevisiae


Alignment Length:592 Identity:115/592 - (19%)
Similarity:203/592 - (34%) Gaps:189/592 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTNLWKAL--TRRKTEDVNEGES-------------QLARVLNLFDLTALGVGSTLGLGVYVLAG 50
            |.:|..|:  :.|:.:::.:.||             .|.:.:....:..:.:|:.:|.|:.|..|
Yeast    79 MNDLTSAISPSSRQAQELEKNESSDNIGANTGHKSDSLKKTIQPRHVLMIALGTGIGTGLLVGNG 143

  Fly    51 QVAFNIAGPA-VTISFLIAAIASAFAGICYAEFAARVPKAGS-AYVYSYVT----------IGEF 103
             .|...|||| :.|.:.|      ...|.|....|    .|. |.|||.:|          :.:.
Yeast   144 -TALVHAGPAGLLIGYAI------MGSILYCIIQA----CGEMALVYSNLTGGYNAYPSFLVDDG 197

  Fly   104 VAFTIGWNLILEYV------IGTASVARGLSGYFDSLINNNMSKALNESMHIDVDFLGDYPDFLS 162
            ..|.:.|...|:::      :.|||:.   ..|:.:.:|                     ||...
Yeast   198 FGFAVAWVYCLQWLCVCPLELVTASMT---IKYWTTSVN---------------------PDVFV 238

  Fly   163 FGMVLLLAAILAFGAK---ESSFLNN---IFTTVNLVTIAIVL-VAGAMNANV---DNWRIPKKD 217
            ....:|:..|..|||:   |:.|..|   |........:.|:: |.||.|...   ..|..|   
Yeast   239 IIFYVLVITINIFGARGYAEAEFFFNCCKILMMTGFFILGIIIDVGGAGNDGFIGGKYWHDP--- 300

  Fly   218 VPEGFGTGGFMPFGIAGVMAGAAKCFYGFVGFDCIATTGEEAINPKRNIP---LSIVVSLIIIFL 279
               |...|........||.|......:.|.|.:.||.|..|..||::.||   ..::..::.:||
Yeast   301 ---GAFNGKHAIDRFKGVAATLVTAAFAFGGSEFIAITTAEQSNPRKAIPGAAKQMIYRILFLFL 362

  Fly   280 SYFGVSTVLTMMLPYYKQD---------KDAPF------------PHAFDSVEWYTIKWIVTIGA 323
            :   ...:|..::||....         |.:|:            ||..::         |.:.:
Yeast   363 A---TIILLGFLVPYNSDQLLGSTGGGTKASPYVIAVASHGVRVVPHFINA---------VILLS 415

  Fly   324 VFALCTSLLGAMFPLPRILYAMGKDGILFKRLSTVNSYTKTPLLATIVSGIFASI---------- 378
            |.::..|   :.:...|:...:.:.|...|..|.::...: ||:|..||.:||.|          
Yeast   416 VLSMANS---SFYSSARLFLTLSEQGYAPKVFSYIDRAGR-PLIAMGVSALFAVIAFCAASPKEE 476

  Fly   379 -----MAMLFNLDQLVDMMSIGTLLAYTIVAICVLVLRYQDEEMTKLVSVKAPNVFRQFFNGNSF 438
                 :..:..|.||           :|..|||:..||::          :|..|..:......|
Yeast   477 QVFTWLLAISGLSQL-----------FTWTAICLSHLRFR----------RAMKVQGRSLGELGF 520

  Fly   439 REPNSMTSSITKVGIVVFAIFCLVWCSLQKVFDLDSTGGIVALSLVG--------------AVLI 489
            :....:..|.....:::..:....|               ||::.:|              |:.|
Yeast   521 KSQTGVWGSAYACIMMILILIAQFW---------------VAIAPIGEGKLDAQAFFENYLAMPI 570

  Fly   490 LICVVIG 496
            ||.:.:|
Yeast   571 LIALYVG 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slifNP_649428.1 2A0303 8..557 CDD:273330 112/585 (19%)
AA_permease_C 507..557 CDD:290617
AGP1NP_009905.3 2A0310 117..597 CDD:273334 108/554 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345726
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 90 1.000 Inparanoid score I1545
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X81
TreeFam 00.000 Not matched by this tool.
65.800

Return to query results.
Submit another query.