DRSC/TRiP Functional Genomics Resources

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Protein Alignment slif and AAT1

DIOPT Version :10

Sequence 1:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_193844.2 Gene:AAT1 / 827860 AraportID:AT4G21120 Length:594 Species:Arabidopsis thaliana


Alignment Length:626 Identity:183/626 - (29%)
Similarity:306/626 - (48%) Gaps:103/626 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTNLWKAL------------TRR-KTEDVNEGES----QLARVLNLFDLTALGVGSTLGLGVYVL 48
            |.|..|||            ||. .::::||.::    ::.:.|..:||...|:|:.:|.|::||
plant    31 MGNYLKALKETPSRFMDRIMTRSLDSDEINEMKARSGHEMKKTLTWWDLMWFGIGAVIGSGIFVL 95

  Fly    49 AGQVAFNIAGPAVTISFLIAAIASAFAGICYAEFAARVPKAGSAYVYSYVTIGEFVAFTIGWNLI 113
            .|..|.|.:||||.:|::::.:::..:..||.|||..:|.||.::.|..|.:|:|:||....|:|
plant    96 TGLEARNHSGPAVVLSYVVSGVSAMLSVFCYTEFAVEIPVAGGSFAYLRVELGDFMAFIAAGNII 160

  Fly   114 LEYVIGTASVARGLSGYFDSLINNNMSKALNESMHIDVDFLG-DYP--DFLSFGMVLLLAAILAF 175
            ||||:|.|:|||..:.||.:|:|:.     .|...|.|..|| ||.  |.::.|:..::..:...
plant   161 LEYVVGGAAVARSWTSYFATLLNHK-----PEDFRIIVHKLGEDYSHLDPIAVGVCAIICVLAVV 220

  Fly   176 GAKESSFLNNIFTTVNLVTIAIVLVAGAMNANVDNWRIPKKDVPEGFGTGGFMPFGIAGVMAGAA 240
            |.|.||..|.|.:.:::|.|..|::||...|:|.|:             ..|.|:|:.||...||
plant   221 GTKGSSRFNYIASIIHMVVILFVIIAGFTKADVKNY-------------SDFTPYGVRGVFKSAA 272

  Fly   241 KCFYGFVGFDCIATTGEEAINPKRNIPLSIVVSLIIIFLSYFGVSTVLTMMLPYYKQDKDAPFPH 305
            ..|:.::|||.::|..||..||.|:||:.:|.|:::..:.|..::..|.:|.||.:.|.||||..
plant   273 VLFFAYIGFDAVSTMAEETKNPGRDIPIGLVGSMVVTTVCYCLMAVTLCLMQPYQQIDPDAPFSV 337

  Fly   306 AFDSVEWYTIKWIVTIGAVFALCTSLLGAMFPLPRILYAMGKDGILFKRLSTVNSYTKTPLLATI 370
            ||.:|.|...|:||..||:..:.|.||.......|.:..:.:..::...|:.||:.|.||:.||:
plant   338 AFSAVGWDWAKYIVAFGALKGMTTVLLVGAIGQARYMTHIARAHMMPPWLAQVNAKTGTPINATV 402

  Fly   371 VSGIFASIMAMLFNLDQLVDMMSIGTLLAYTIVAICVLVLRYQDEEMTKLVSVKAPNVFRQFFNG 435
            |.....:::|....|..|.|::|:.||..:..||:.:||.||.   :|...|.:..|.|..|   
plant   403 VMLAATALIAFFTKLKILADLLSVSTLFIFMFVAVALLVRRYY---VTGETSTRDRNKFLVF--- 461

  Fly   436 NSFREPNSMTSSITKVGIVVFAIFCLVWCSLQKVFDLDSTGGIVALSLVGAVLILICVVIGMQPV 500
                           :|:::                ..||...|..:|.....|..|:.:.:..:
plant   462 ---------------LGLIL----------------ASSTATAVYWALEEEGWIGYCITVPIWFL 495

  Fly   501 STIELTF-----------KVPLVPFVPCLSVFANLYLMFQLDLNTWIRFLIWIVIGYVIYFCYGM 554
            ||:.:.|           .|||||::|..|:..|::|:..:|..:::||.||..|..:.|..:|:
plant   496 STVAMKFLVPQARAPKIWGVPLVPWLPSASIAINIFLLGSIDTKSFVRFAIWTGILLIYYVLFGL 560

  Fly   555 RNSTQISRSRSHAEVAASALQNQGQHVNPGFEPDYKVENGG 595
            ..:...:::....:   .|||              |.|.||
plant   561 HATYDTAKATLKEK---QALQ--------------KAEEGG 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slifNP_649428.1 2A0303 8..557 CDD:273330 172/579 (30%)
AAT1NP_193844.2 2A0303 58..565 CDD:273330 169/561 (30%)

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