DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slif and slc7a10a

DIOPT Version :9

Sequence 1:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_001373301.1 Gene:slc7a10a / 567420 ZFINID:ZDB-GENE-080116-1 Length:511 Species:Danio rerio


Alignment Length:510 Identity:106/510 - (20%)
Similarity:205/510 - (40%) Gaps:77/510 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KALTRRKTEDVNEGESQLARVLNLFDLTALGVGSTLGLGVYVL-------AGQVAFNIAGPAVTI 63
            |.|..|..:..::....|.:.:.|....|:.:|:.:|.|:::.       ||.|.|::      |
Zfish    18 KMLDSRGNQSGSKDRVTLKKEIGLLSACAIIIGNIIGSGIFISPKGVLDHAGSVGFSL------I 76

  Fly    64 SFLIAAIASAFAGICYAEFAARVPKAGSAYVYSYVT--IGEFVAFTIGWNLIL-EYVIGTASVAR 125
            .:::.....|...:||||....:||:|..  |||||  .|..|.|.:.|:.:| .|....|.:|.
Zfish    77 VWVLGGGICALGSLCYAELGVTIPKSGGD--YSYVTEIFGGLVGFLLLWSAVLIMYPTTLAVIAL 139

  Fly   126 GLSGY-----FDSLINNNMSKALNESMHIDVDFLGDYPDFLSFGMVLLLAAILAFGAKESSFLNN 185
            ..|.|     |.:.:...::..|                 ||...||.|..:.....:..:.:.:
Zfish   140 TFSNYVLQPAFPNCLPPYIATRL-----------------LSTTCVLFLTWVNCSSVRWGTRIQD 187

  Fly   186 IFTTVNLVTIAIVLVAGAMNANVDNWRIPKKDVPEGFGTGGFMPFGIAGVMAGA-AKCFYGFVGF 249
            :||...|:.:.:::|.|.:.....::     |..|......|:.....|.:|.| .:..:.:.|:
Zfish   188 VFTVGKLLALVLIIVVGMVQIAKGHY-----DALEPQAAFEFIKDPSVGQIALAFLQASFAYSGW 247

  Fly   250 DCIATTGEEAINPKRNIPLSIVVSLIIIFLSYFGVS-TVLTMMLPYYKQDKDAPFPHAFDSVEWY 313
            :.:....||.:.|::|:|.:|.:|:.::.|.|...: ...:.|.|....:.:| ....|......
Zfish   248 NFLNYVTEEVVEPRKNLPRAIYISIPLVTLVYTLTNIAYFSSMSPQELLESNA-VAVTFGEKLLG 311

  Fly   314 TIKWIVTIGAVFALCTSLLGAMFPLPRILYAMGKDGILFKRLSTVNSYTKTPLLATIVSGIFASI 378
            ...|::.|....:....:.|.:|...|:.::..::|.|...|:.::..:.||:.|.||......:
Zfish   312 MFSWVMPISVALSTFGGINGYLFTSSRLCFSGAREGHLPYLLAMIHLKSCTPIPALIVCCTATIV 376

  Fly   379 MAMLFNLDQLVDMMSIGTLLAYTIVAICVLVLRYQDEEMTKLVSVKAPNVFRQFFNGNSFREPNS 443
            :..:.:...|::.:|....|:|.:....:|..|:           |.||:||..           
Zfish   377 ILCIGDTHNLINYVSFINYLSYGVTIAGLLYYRW-----------KKPNMFRPI----------- 419

  Fly   444 MTSSITKVGIVVFAIFCLVWCSLQKVFDLDSTGGIVALSLVGAVLILICVVIGMQ 498
                  ||.::|...:.:.|..|.. |.|.|...:..:.||..:..:....||:|
Zfish   420 ------KVNLLVPCSYLVFWAVLLG-FSLYSEPVVCGMGLVIMLTGVPIYFIGVQ 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slifNP_649428.1 2A0303 8..557 CDD:273330 105/508 (21%)
AA_permease_C 507..557 CDD:290617
slc7a10aNP_001373301.1 2A0308 1..497 CDD:273332 106/510 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592998
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.940

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