DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment slif and CG1607

DIOPT Version :9

Sequence 1:	NP_649428.1	Gene:	slif / 40510	FlyBaseID:	FBgn0037203	Length:	604	Species:	Drosophila melanogaster
Sequence 2:	NP_001263139.1	Gene:	CG1607 / 43707	FlyBaseID:	FBgn0039844	Length:	507	Species:	Drosophila melanogaster

Alignment Length:	435	Identity:	91/435 - (20%)
Similarity:	177/435 - (40%)	Gaps:	69/435 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly    19 GESQLARVLNLFDLTALGVGSTLGLGVYVL-AGQVAFNIAGPAVTISFLIAAIASAFAGICYAEF 82
            ||..|...::|.:...:.|||.:|.|::|. .|.:.:..:.....|.::|:.:.|.....||||.
  Fly    41 GEVTLKAKMSLLNGCTVIVGSIIGSGIFVSPTGVLMYTGSVNLALIVWVISGLFSMVGAYCYAEL 105

  Fly    83 AARVPKAGSAYVYSYVTIGEFVAFTIGWNLILEYVIGTASVARGLSGYFDSLINNNMSKALNESM 147
            ...:.|:|:.|.|...|.|.|:||...|   :|.:|     .|..|   .:::      ||..|.
  Fly   106 GTMITKSGADYAYIMETFGPFMAFIRLW---IECMI-----VRPCS---QAIV------ALTFST 153

  Fly   148 HIDVDFLGDYPD---------FLSFGMVLLLAAILAFGAKESSFLNNIFTTVNLVTIAIVLVAGA 203
            ::...|   :|:         .|:...:|:|..|..:..|.::.:.:|||...|:.:.|::..|.
  Fly   154 YVLKPF---FPECTPPEDSARLLAVCCILVLTLINCWDVKWATAVQDIFTYAKLLALFIIIATGV 215

  Fly   204 MN---ANVDNWRIPKKDVPEGFGTGGFMPFGIAGVMAGAAKCFY----GFVGFDCIATTGEEAIN 261
            ..   .|...:.....|..                :...|..||    .:.|::.:....||..:
  Fly   216 YQLYLGNTQYFTFENTDTK----------------VTSIALSFYSGLFAYNGWNYLNFIIEELKD 264

  Fly   262 PKRNIPLSIVVSLIIIFLSYFGVS-TVLTMMLPYYKQDKDAP----FPHAFDSVEWYTIKWIVTI 321
            |.:|:|.:|.:|..::.:.|...: :..|::.|.......|.    ...||..:.|       ||
  Fly   265 PVKNLPRAIAISCTLVTIVYVMANVSFYTILSPDEVMGSSAVAVTYAERAFGMLAW-------TI 322

  Fly   322 GAVFALCT--SLLGAMFPLPRILYAMGKDGILFKRLSTVNSYTKTPLLATIVSGIFASIMAMLFN 384
            ....||.|  ::.|.:....|:.||...:|.:.:.|:.:.....||..|.:...:.:.:...:.:
  Fly   323 PVFVALSTFGAVNGILLTSSRLFYAGANNGQMPEILTMIQIQRFTPTPAVLAMALLSMLYLTVSD 387

  Fly   385 LDQLVDMMSIGTLLAYTIVAICVLVLRYQDEEMTKLVSVKAPNVF 429
            :..|::.:...|.|:..:..:|:..||:....:.:  .::.|.||
  Fly   388 IFALINYVGFATWLSIGVAVLCLPWLRWAQPNLPR--PIRVPMVF 430

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
slif	NP_649428.1	2A0303	8..557	CDD:273330	91/435 (21%)
slif	NP_649428.1	AA_permease_C	507..557	CDD:290617
CG1607	NP_001263139.1	2A0308	42..501	CDD:273332	90/434 (21%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45466563
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840