DRSC/TRiP Functional Genomics Resources

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Protein Alignment slif and mnd

DIOPT Version :9

Sequence 1:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_524074.1 Gene:mnd / 39625 FlyBaseID:FBgn0002778 Length:499 Species:Drosophila melanogaster


Alignment Length:481 Identity:106/481 - (22%)
Similarity:202/481 - (41%) Gaps:73/481 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 QLARVLNLFDLTALGVGSTLGLGVYVL-AGQVAFNIAGPAVTISFLIAAIASAFAGICYAEFAAR 85
            :|.:.:.|.|..|:.||..:|.|::|. .|.:.|:.:.....|.::::.:.|....:||||....
  Fly    38 KLKKQIGLLDGVAIIVGVIVGSGIFVSPKGVLKFSGSIGQSLIVWVLSGVLSMVGALCYAELGTM 102

  Fly    86 VPKAGSAYVYSYVTIGEFVAFTIGWNLILEYV-IGTASVARGLSGYFDSLINNNMSKALNESMHI 149
            :||:|..|.|.....|...||...|..:|..| .|.|..|...:.|        :.|....|...
  Fly   103 IPKSGGDYAYIGTAFGPLPAFLYLWVALLILVPTGNAITALTFAIY--------LLKPFWPSCDA 159

  Fly   150 DVDFLGDYPDFLSFGMVLLLAAILAFGAKESSFLNNIFTTVNLVTIAIVLVAGA---MNANVDNW 211
            .::.:    ..|:..|:.:|..|..:..|..:.:.:|||...:|.:.:::.||.   .:.|.::|
  Fly   160 PIEAV----QLLAAAMICVLTLINCYNVKWVTRVTDIFTGTKVVALLVIVGAGVWWLFDGNTEHW 220

  Fly   212 RIPKKDVPEGFGTGGFMPFGIAGVMAGAAKCFY----GFVGFDCIATTGEEAINPKRNIPLSIVV 272
            ..|        .:||....|.      .|..||    .:.|::.:....||..:|.||:|.:|.:
  Fly   221 DNP--------FSGGLQDPGY------IALAFYSGLFSYSGWNYLNFVTEELKDPYRNLPKAICI 271

  Fly   273 SLIIIFLSYFGVSTV--LTMMLPYYKQDKDAPFPHAFDSVEWYTIKWIVTIGAVFALCTSLLGAM 335
            |:.::.:.|. ::.:  .:::.|......||......|.:..| :.||:......:...||.||:
  Fly   272 SMPVVTVIYM-ITNIAYFSVLSPDEILSSDAVAVTFGDKMLGY-MSWIMPFAVACSTFGSLNGAI 334

  Fly   336 FPLPRILYAMGKDGILFKRLSTVNSYTKTPLLATIVSGIFASIMAMLFNLDQLVDMMSIGTLLAY 400
            |...|:.:...::|.|...:|.:|....||:.:.|..|:...::..:.::..|::.:|....| :
  Fly   335 FASSRLFFVGARNGHLPAAISLINVNCLTPVPSLIFLGVLTLLLLFIEDVYVLINYVSYVEAL-F 398

  Fly   401 TIVAIC-VLVLRYQDEEMTKLVSVKAPNVFRQFFNGNSFREPNSMTSSITKVGIVVFAIFCLVWC 464
            |::::. :|.:||           |.|...|..                 ||.:.:..|:.:| |
  Fly   399 TLISVSGLLWMRY-----------KQPKTERPI-----------------KVNLALPIIYLIV-C 434

  Fly   465 SLQKVFDLDSTGGIVALSLVGAVLIL 490
            ....:|....|..:|.   :|.::||
  Fly   435 LFLVIFSCTQTPYVVG---IGTIIIL 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slifNP_649428.1 2A0303 8..557 CDD:273330 106/481 (22%)
AA_permease_C 507..557 CDD:290617
mndNP_524074.1 2A0308 22..496 CDD:273332 106/481 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466578
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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