DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slif and tadr

DIOPT Version :9

Sequence 1:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_724308.2 Gene:tadr / 35370 FlyBaseID:FBgn0032911 Length:719 Species:Drosophila melanogaster


Alignment Length:697 Identity:126/697 - (18%)
Similarity:238/697 - (34%) Gaps:237/697 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 NLFDLTALGVGSTLGLGVYVLAGQVAFNIA-GPAVTISFLIAAIASAFAGICYAEF-AARVP--K 88
            :|.|:...|.|:.|.||..|::..:.:|.| .|::.:..::|.:..|.|..|.... :.::|  :
  Fly     5 SLLDVLCSGSGARLALGASVISYLIVYNEASAPSLLVGVVLATVYGAMAARCKTSLRSLQMPYVR 69

  Fly    89 AGSAYVYSYVTIGEFVAFTIGWNLILEYVIGTASVARGLSGYFDSLINNNMSKAL--------NE 145
            |.:.:.:|.:    |:|.   |...|..|...|::||.||...|:: ...:::.|        ||
  Fly    70 ATNKFDFSCL----FLAI---WLDALATVCACAALARTLSACLDAM-TGGLARILILGRNAPANE 126

  Fly   146 SMHIDVDFLGDYPDFLSFGMVLLLAAILAFGAKESSFLNNIFTT----VNLVTIAIVLVAGAMNA 206
                      .:||.|...:|.|:..:...|.:.|...:.|.|.    :|.:..|:....|.|.|
  Fly   127 ----------PWPDVLGVSVVFLVTGMFMLGLEHSRAFSLILTLGMFGLNAILSAVGWWRGDMLA 181

  Fly   207 -NVDNWRIPKKDVPEGFGTGGFMPFGIAGVMAGAAKCFYGFVG----------FDCIATTGEEAI 260
             :.|::               |.|.||:.|..|.|...|.|.|          |.....||    
  Fly   182 WSADSY---------------FQPDGISSVFLGTALLTYSFPGDWPQQLRGGRFTATLITG---- 227

  Fly   261 NPKRNIPLSIVVSLIIIFLSYFGVSTVLTMMLPYYKQDKDAPFPHAFDSVEWYTIKWIVTIGAVF 325
                      :||..:: |:...:|||:     :|:..:|......|:.::......:|...|..
  Fly   228 ----------LVSTSLL-LTAICLSTVV-----HYRSQEDYVAVPLFNILDENGFHKLVPASACM 276

  Fly   326 ALCTSLLGAMFPLPRILY------AMGKDGILFKRLSTVNSYTKTPLLATIVSGIFASIMAMLFN 384
            .|.||....:...|. ||      |..:..||.|::|..:|.:..|:||..::|...:::|....
  Fly   277 LLLTSSAAFLELFPE-LYGIVVRLATSEWRILSKQISYESSESGNPVLAVFIAGSMCAMLAFACP 340

  Fly   385 LDQLVDMMSIGTLLAYTIVAICVLVLRYQDEEMT------------------------------- 418
            |..|...::.|.:....:.|:.:|.:.|:.:.|.                               
  Fly   341 LQHLSYTLAAGHMGGVFLRALYLLYIPYRPKYMAPSSESSLSYSRLSTAPFAKSSSYSSAATSSS 405

  Fly   419 -------------KLVSVKAPNVF----------------------------------------- 429
                         |..::|.|...                                         
  Fly   406 SRLKRSLWKIGLPKHSNLKKPKTKPRNKQELEKEWLLLGEPTSPCPQREGRDVESTILSDGEPPP 470

  Fly   430 RQFFNGNSFREPNSMTSS--------------ITKVG---------------IVVFAIFCLVWCS 465
            ..|...:.|.:.:|.||:              :|..|               :.:|||..:    
  Fly   471 SDFEYPDKFDKSDSDTSTDIDAIVDEYREKIKVTTAGPLERSVRVPTVSSWRVTIFAIVVI---- 531

  Fly   466 LQKVFDLDSTGGIVALSLVGAVL-------------ILICVVIGMQPVSTIELTFKVPLVPFVPC 517
                      |..:||.:.|.::             :::.:::|..|..|..:   :.:.|.:..
  Fly   532 ----------GLGIALCIAGLMMHWAPAALTGGIGVLIVTIMMGFIPKYTGSV---INVSPVICG 583

  Fly   518 LSVFANLYLMFQLDLNTWIRFLIWIVIGYVI------YFCYGMRNST 558
            :|:...:.|.....:::|...|||::.|.::      |.|....::|
  Fly   584 MSLLMGVILFSGCAIHSWPGLLIWLMAGLILVIRCDKYCCNCFEHTT 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slifNP_649428.1 2A0303 8..557 CDD:273330 125/694 (18%)
AA_permease_C 507..557 CDD:290617 10/55 (18%)
tadrNP_724308.2 2A0303 5..>209 CDD:273330 56/236 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1286
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR43243
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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