DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slif and CG12531

DIOPT Version :9

Sequence 1:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_608350.2 Gene:CG12531 / 32986 FlyBaseID:FBgn0031064 Length:812 Species:Drosophila melanogaster


Alignment Length:705 Identity:253/705 - (35%)
Similarity:368/705 - (52%) Gaps:139/705 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TNLWKALTRRKTEDVNEGESQ-----LARVLNLFDLTALGVGSTLGLGVYVLAGQVAFNIAGPAV 61
            |.|.|.:..:..:.:.:|.:|     |.:.||..|||:||:||..|.|:|::||.||..||||.|
  Fly    27 TLLPKLIRTKDVKQLQDGNAQPQKPKLTKCLNTLDLTSLGIGSCCGTGMYLVAGMVAQKIAGPGV 91

  Fly    62 TISFLIAAIASAFAGICYAEFAARVP-KAGSAYVYSYVTIGEFVAFTIGWNLILEYVIGTASVAR 125
            .|||:||||||.|:|.|||||..||| .:||||:||||.:||||||.||||:||||:|||::.|.
  Fly    92 IISFIIAAIASIFSGACYAEFGVRVPHTSGSAYMYSYVAVGEFVAFIIGWNMILEYLIGTSACAC 156

  Fly   126 GLSGYFDSLINNNMSKALNESMHIDVDFLGDYPDFLSFGMVLLLAAILAFGAKESSFLNNIFTTV 190
            .||..||||..|.:::.::||:.   ...|..|||::||:.||:..:||.||.:|...|:....|
  Fly   157 ALSSSFDSLTGNAIARTISESIG---TIFGKPPDFIAFGITLLMTCVLAMGASKSVIFNHSLNAV 218

  Fly   191 NLVTIAIVLVAGAMNANVDNWRIPKKDVPEGFGTGGFMPFGIAGVMAGAAKCFYGFVGFDCIATT 255
            ||.|...|:.||....:...|...:          ||:|:|.:||.:|||.|||.|:|||.||||
  Fly   219 NLATWVFVMAAGLFYVDTKTWSEHQ----------GFLPYGWSGVFSGAATCFYAFIGFDIIATT 273

  Fly   256 GEEAINPKRNIPLSIVVSLIIIFLSYFGVSTVLTMMLPYYKQDKDAPFPHAFDSVEWYTIKWIVT 320
            ||||.||:::||.:||.||:::.::|..||.|||:::||...:..|.....:..|.....:.:|.
  Fly   274 GEEAHNPQKSIPKAIVGSLVVVLIAYVSVSLVLTLVVPYDHINTGAALVQMWSYVNAPKCRAVVA 338

  Fly   321 IGAVFALCTSLLGAMFPLPRILYAMGKDGILFKRLSTVNSYTKTPLLATIVSGIFASIMAMLFNL 385
            |||...|..::.|:|||:||::|||.:||::|::||.:...|..|.||||.||:.|:::|:...|
  Fly   339 IGATAGLSVAMFGSMFPMPRVIYAMAQDGLIFRQLSQLWHRTNVPGLATIGSGLAAALVALTVRL 403

  Fly   386 DQLVDMMSIGTLLAYTIVAICVLVLRYQDEEMTKLVSV--------------------------- 423
            :.||:|||||||||||:|:.||||||||... |.||.:                           
  Fly   404 EILVEMMSIGTLLAYTLVSTCVLVLRYQPHS-TSLVELLPAQLRTPVAHGTASDSRSHVTPAEVL 467

  Fly   424 ------------------------KAPNVF-----RQF---------FNGNSFREPNSMTSSITK 450
                                    .:|..|     .||         |.|:....|...|...|.
  Fly   468 EVPGKLTIKRVTRGMSDSDDSFIDDSPEGFLGGRDDQFLVSDRSENKFYGSVHGAPTGPTGQATA 532

  Fly   451 VG----------IVVFAIFC----------------------LVWCSLQKVFDLDS------TGG 477
            ..          |..:|..|                      ||......:|.||.      :||
  Fly   533 FDAMGLNFVTRKIHDYAYLCPGFFPWINPGQATAESGMYVTKLVGIMFGLIFFLDLFAAIGWSGG 597

  Fly   478 IVA----LSLVGAVLILICVVIGMQPVSTIELTFKVPLVPFVPCLSVFANLYLMFQLDLNTWIRF 538
            :.|    :..:|..:||:  :|..||.:...|.|..|.:||:|.:::..|:||:|:|.:.|.:||
  Fly   598 LAAFIYFILFIGIFVILL--IISRQPQNRYALAFLTPGLPFIPAIAITVNIYLIFKLSILTLVRF 660

  Fly   539 LIWIVIGYVIYFCYGMRNST----------QISRSRSHAEVAASALQNQGQHVNP 583
            .:|:.:|:::||.||:.:|:          .:..|::..|.|....|:..|...|
  Fly   661 TVWMSLGFIMYFYYGITHSSLEQASDDLELHVDYSKNVEEKAVWDQQSYNQTHEP 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slifNP_649428.1 2A0303 8..557 CDD:273330 243/661 (37%)
AA_permease_C 507..557 CDD:290617 19/49 (39%)
CG12531NP_608350.2 2A0303 52..679 CDD:273330 241/642 (38%)
AA_permease_C 629..679 CDD:290617 19/49 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466581
Domainoid 1 1.000 307 1.000 Domainoid score I322
eggNOG 1 0.900 - - E2759_KOG1286
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 352 1.000 Inparanoid score I609
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D439017at2759
OrthoFinder 1 1.000 - - FOG0000131
OrthoInspector 1 1.000 - - mtm14985
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR43243
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X81
109.900

Return to query results.
Submit another query.