DRSC/TRiP Functional Genomics Resources

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Protein Alignment slif and SPBPB2B2.01

DIOPT Version :9

Sequence 1:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_596849.1 Gene:SPBPB2B2.01 / 2541403 PomBaseID:SPBPB2B2.01 Length:585 Species:Schizosaccharomyces pombe


Alignment Length:490 Identity:94/490 - (19%)
Similarity:183/490 - (37%) Gaps:103/490 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KTEDVNEGESQLARVLNLFDLTALGVGSTLGLGVYVLAGQVAFNIAGPAVTISFLIAAIASAFAG 76
            |.:..:.|:. |.|.|....:..:|:|..:|.||:|.:.:..:.....:|.|.:.|.........
pombe    69 KNQQDSAGQG-LKRRLKSRHIQMIGIGGAIGTGVWVGSSKSLYRGGAASVLIDYCIVGTMVFCTV 132

  Fly    77 ICYAEFAARVPKAGSAYVYSYVTIGEFVAFTIGWNLILEYVI--------GTASVARGLSGYFDS 133
            ....|.|...|..||...::...|.|...|.:.||.:..:::        ||..:.     |:.:
pombe   133 YALGELAVAFPTRGSFVTHATRFIDESWGFALSWNYVFSFIVTIPLELTTGTMMIK-----YWTN 192

  Fly   134 LINNNMSKALNESMHIDVDFLGDYPDFLSFGMVLLLAAILAFGAKESSFLNNIFTTVNLVTIAIV 198
                     ||..:.:.|             .::.|..|..||.|....:..|.:|:.:|.:...
pombe   193 ---------LNSGIWVTV-------------FIVFLFFINIFGVKGYGEMEFIMSTIKVVAMCGF 235

  Fly   199 LVAGAMNANVDNWRIPKKDVPEGF-GTGGFMP-------FGIAGVMAGAAKCFYGFVGFDCIATT 255
            ::.|.:   :|...:|...  .|: ||..|..       .|...|...||   :.|.|.:.:...
pombe   236 IILGII---IDCGGVPTDH--RGYMGTHIFRENAFRHKFKGFCAVFTSAA---FSFSGTEYVGVA 292

  Fly   256 GEEAINPKRNIPLSI-----------VVSLIIIFLSYFGVSTVLTMMLPYYKQDKDAPFPHAFDS 309
            ..|..||.:..|:::           ::||.|:.|...|....||   .|:..|. :||..|...
pombe   293 AAETENPAKAFPVAVRQTLFRIAIFYILSLFIVSLLISGADPRLT---SYHGVDA-SPFVLAIKD 353

  Fly   310 VEWYTIKWIVTIGAVFALCTSLLGAMFPLPRILYAMGKDGILFKRLSTVNSYTKTPLLATIVSGI 374
            .....:..|:....:.::.:|....::...|.::::|.:|...|..:.|:...: ||:|.::..:
pombe   354 ANIKALPSILNAIILISVISSANAQLYAGSRAIHSLGCNGFAPKCFTLVDREGR-PLVALLILFL 417

  Fly   375 FASIMAMLFN------LDQLVDMMSIGTLLAYTIVAICVLVLRY------QDEEMTKLVSVKAPN 427
            |..:..::..      .|.::.:..:|||..:.  :||:..:||      |:..:.::..|...|
pombe   418 FMFLGYLVETGQYDTVFDWMLSISGLGTLFCWG--SICLAHIRYRAAMKHQNRSLKEVGFVSPFN 480

  Fly   428 VFRQFFNGNSFREPNSMTSSITKVGIVVFAIFCLV 462
            |:..::                     .|.:.|||
pombe   481 VYASYY---------------------AFILVCLV 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slifNP_649428.1 2A0303 8..557 CDD:273330 94/490 (19%)
AA_permease_C 507..557 CDD:290617
SPBPB2B2.01NP_596849.1 LysP 36..584 CDD:223903 94/490 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 75 1.000 Inparanoid score I1891
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X81
TreeFam 00.000 Not matched by this tool.
43.960

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