DRSC/TRiP Functional Genomics Resources

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Protein Alignment slif and aat1

DIOPT Version :10

Sequence 1:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_595053.1 Gene:aat1 / 2541042 PomBaseID:SPBC359.03C Length:579 Species:Schizosaccharomyces pombe


Alignment Length:506 Identity:115/506 - (22%)
Similarity:186/506 - (36%) Gaps:110/506 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NLWKALTRRKTEDVNEGESQLARVLNLFDLTALGVGSTLGLGVYVLAGQVAFNIAGPA-VTISFL 66
            ||.......:..|.|.|.: |.|.|:...:..:.:|..:|.|:||.:|. |....||| |.|:::
pombe    54 NLIDGFKPAREADGNGGPA-LKRGLSTRHMQLMSIGGAIGSGLYVGSGS-ALADGGPASVIINYI 116

  Fly    67 IAAIASAFAGICYAEFAARVPKAGSAYVYSYVTIGEFVAFTIGWNLILEYVIGTASVARGLSGYF 131
            :..|...|......|.|...|.|||...|:...|.....|.:.||...              .||
pombe   117 LIGIMMFFVIYALGEMAVAYPVAGSFNTYATRFIDPAWGFAVSWNYFF--------------NYF 167

  Fly   132 DSLINNNMSKALNESMHIDVDFLGDYPDFLSFGMVLLLAAILAFGAKESSF-LNNIFTTVNLVTI 195
            .:......:.|:..:...||:.......||...:.:.|..:..||..|... |..:..||..:.:
pombe   168 VTFPFELTTCAITFTFWTDVNCAVWISIFLVVVIGINLFGVRVFGEVEFVLALIKVVATVGFIIL 232

  Fly   196 AIVLVAGAMNAN----VDNWRIPKKDVPEGFGTGGFMPFGIAGVMAGAAKCFYGFVGFDCIATTG 256
            ||::..|.:..:    :....|.:|....||.       |...|...||   :.|.|.:.:....
pombe   233 AIIINCGGVPTDHRGYIGGSIIKQKPFRHGFK-------GFCSVYTTAA---FSFSGTEIVGLAA 287

  Fly   257 EEAINPKRNIPLSI-----------VVSLIIIFLSYF---------GVSTVLTMMLPYYKQDKDA 301
            .|..:|::.:|.::           :||||:|.|...         |.::|...:|...:.:...
pombe   288 AEVGDPRKTLPGAVKQVFWRVAIFYIVSLILIGLLISPDDPKLMGNGSASVSPFVLAIQEANIKG 352

  Fly   302 PFPHAFDSVEWYTIKWIVTIGAVFALCTSLLGAMFPLPRILYAMGKDGILFKRLSTVNSYTK--- 363
             .|..|::|      .|:::.:|....|...|      |.|:.|..    .|:......||.   
pombe   353 -LPSVFNAV------IIISVISVTNSSTYTAG------RTLHGMAN----LKQAPAFFKYTDRLG 400

  Fly   364 TPLLATIV---SGIFASIMAMLFNLDQLVDMMSIGTLLA-------YTIVAICVLVLRYQDEEMT 418
            .||:|.||   .|.||.|.....|.:.:.|.: ...|||       :|..:||:..:        
pombe   401 RPLIAMIVVLSFGFFAYINEANNNGNDISDTV-FDWLLAISGLSNFFTWGSICLSHI-------- 456

  Fly   419 KLVSVKAPNVFRQFF--NGNSFRE-----PNSMTSSITKVGIVVFAIFCLV 462
                     :||..|  .|:|.:|     |..:..|:..:|   |.|.||:
pombe   457 ---------MFRLAFKKQGHSLKELGFVSPMGIWGSVIGLG---FNILCLM 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slifNP_649428.1 2A0303 8..557 CDD:273330 113/501 (23%)
aat1NP_595053.1 AA_permease_2 74..548 CDD:459263 109/485 (22%)

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