DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slif and SPOM_SPBC1652.02

DIOPT Version :10

Sequence 1:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_596769.2 Gene:SPOM_SPBC1652.02 / 2540163 PomBaseID:SPBC1652.02 Length:594 Species:Schizosaccharomyces pombe


Alignment Length:535 Identity:116/535 - (21%)
Similarity:217/535 - (40%) Gaps:106/535 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ESQLARVLNLFD------LTALGVGSTLGLGVYVLAGQVAFNIAGP-AVTISFLIAAIASAFAGI 77
            :::.|.|.|..|      |..:.:||.:|.|::|..|:...| ||| ::.|:|:|.:.......:
pombe    56 DNEFAEVHNSEDFLKPRHLQMIAIGSCIGTGLFVSTGKSLKN-AGPGSLMINFIILSAMILALIL 119

  Fly    78 CYAEFAARVPKAGSAYVYSYVTIGEFVAFTIGWNLILEYVIGTASVARGLSGYFDSLINNNMSKA 142
            ...|....:|...|..:|:...:...:.|...|   |.:.|....:...:|...: :::...::.
pombe   120 SLGEMCCFLPNQSSITMYTGRLLNNNIGFAQSW---LYFWIWLTVLPSEISAACE-VVDFWTTQH 180

  Fly   143 LNESMHIDVDFLGDYPDFLSFGMVLLLAAILAFGAKE-------SSFLNNIFTTVNLVTIAIVLV 200
            ||.::.:.:        ||::     :..:.||||:.       ||||..:...: ...:||::.
pombe   181 LNPAIWVTI--------FLAY-----VVLVNAFGARSYGECEFVSSFLKVVIVII-FFFVAIIIN 231

  Fly   201 AGA------MNANVDNWRIPKKDVPEGFGTGGFMPFGIAGVMAGAAKCFYGFVGFDCIATTGEEA 259
            .||      :.|:.  |..|      |....||.  |...|...:|   |...|.:.|.|.....
pombe   232 CGAAPKGGYIGAHY--WHHP------GSFRNGFK--GFCSVFISSA---YSLSGTENIGTAAGNT 283

  Fly   260 INPKRNIPLSIVVSLIIIFLSYFGVSTV--LTMMLPYYKQD--KDAPF------------PHAFD 308
            .||:|.||.:  |..:...:.:|.:.|:  :|:::||...|  ..:||            ||..:
pombe   284 SNPQRAIPSA--VKKVFYRMGFFYIITIFLITLVVPYDNPDLGNVSPFIIAIKNGGIHVLPHITN 346

  Fly   309 SVEWYTIKWIVTIG--AVFALCTSLLGAMFP--LPRILYAMGKDGILFKRLSTVNSYTKTPLLAT 369
            :|   .:..::::|  ||||...:.:..:..  .||.|..:.:.|      ..|.||..:..:|.
pombe   347 AV---ILVSVLSVGNAAVFAASRNAMALVKQGWAPRFLGRVDQKG------RPVISYLCSLAMAC 402

  Fly   370 IVSGIFASIMAMLFNLDQLVDMMSIGTLLAYTIVAICVLVLRYQDEEMTKLVSVKAPNVFRQFFN 434
            |.....|...:::|  |.|:.:...|..:.:.:..|..:.|||      .:.:.|.|:...    
pombe   403 IAYVNAAPDGSVVF--DWLMSVSGGGAFVIWGLSFIDHIRLRY------AMKAQKIPDTVL---- 455

  Fly   435 GNSFREPNSMTSSITKVGIVVFAIFCLVWCSLQKV-FDLDSTGGIVALSLVGAVLILICVVIG-- 496
              .::.|.|:..|...|.|...|:..||:.|:..| .:..|..|.. :|.:|..:.:..::|.  
pombe   456 --PYKFPGSVYLSYYGVLINFLALCALVYISIFPVTHEKPSAYGFF-VSFLGPSVFIAYLLISPI 517

  Fly   497 -----MQPVSTIELT 506
                 .|.:..::||
pombe   518 FVKPTFQSLKDVDLT 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slifNP_649428.1 2A0303 8..557 CDD:273330 116/535 (22%)
SPOM_SPBC1652.02NP_596769.2 AA_permease_2 69..532 CDD:459263 110/520 (21%)

Return to query results.
Submit another query.