DRSC/TRiP Functional Genomics Resources

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Protein Alignment slif and agp3

DIOPT Version :10

Sequence 1:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_588521.1 Gene:agp3 / 2539173 PomBaseID:SPCC965.11C Length:537 Species:Schizosaccharomyces pombe


Alignment Length:598 Identity:116/598 - (19%)
Similarity:198/598 - (33%) Gaps:202/598 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 TEDVNEGESQ-LARVLNLFDLTALGVGSTLGLGVYVLAGQVAFNIAGP-AVTISFLIAAIASAFA 75
            |.|..|..|. :.|.|....::.:.:...:|.||::..|. |.:|.|| .:.:.|.|.:|.....
pombe    29 TVDAAENNSNGIKRGLKTRHVSMMALAGIIGPGVFIGMGS-ALHIGGPVGLIVGFAIVSIVVFGV 92

  Fly    76 GICYAEFAARVPKAGSAYVYSYVT-----IGEFVAFTIGWNLILEYVIGTASVARGLSGYFDSLI 135
            .:...||       .|.:.:::.|     :.......||||.::.::...|:....|:..     
pombe    93 MLSIGEF-------NSLFDFNFNTHAARWVDPAFGAAIGWNYVIVWLTNIAAEYTSLTSI----- 145

  Fly   136 NNNMSKALNESMHIDVDFLGDYPDFLSFGMVLL---------LAAILAFGAKE--SSFLNNIFTT 189
                           :.:.|  |...|:|..|:         :..:..||..|  .:|:..:|.|
pombe   146 ---------------LQYWG--PHVPSYGFFLIFWGFFTCYQMLGVSVFGESEYILAFIKLLFIT 193

  Fly   190 VNLVTIAIVLVAGAMNANVDNWRIPK--KDVPEGFGTGGFM-PFGIAGVMAGAAKCFYGFVGFDC 251
             .....||:..||    .:.:.:.|.  |::|...|.||.: .|..|||.         |.|.:.
pombe   194 -GFYIFAIIYAAG----GIPHHKPPNLFKEMPLAHGFGGIVSAFVYAGVF---------FSGVES 244

  Fly   252 IATTGEEAINPKRNIPLSIVVSLIIIFLSYFGVS-----TVL-----------TMMLPYYKQDKD 300
            ::.|..|:.|||:.|||::..:...|...|||:|     ||.           |:..|......:
pombe   245 VSMTAAESKNPKKAIPLAVRQTFWRILYVYFGISISYGITVAWNDPNLSSGSKTLKSPMTIAIMN 309

  Fly   301 APFPHAFDSVEWYTIKWIVTIGAVFALC-TSLLGAMFPLPRILYAMGKDGI---LFKRLSTVNSY 361
            |.:.||.|.|.          ..:...| :|:...::...|.||.:.|||:   :|||:..    
pombe   310 AGWNHAGDFVN----------AVILITCLSSINSGIYIGSRSLYNLAKDGMAPKIFKRVDK---- 360

  Fly   362 TKTPLLATIVSGIFASIMAMLFNLDQLVDMMSIGTLLAYTIVAICVLVLRYQDEEMTKLVSVKAP 426
            ...|.:|.....:|..:..|.:         |.|.:.||..:                       
pombe   361 RGVPWVAVHSVHLFGFLSIMNY---------STGAVKAYGYI----------------------- 393

  Fly   427 NVFRQFFNGNSFREPNSMTSSITKVGIVVFAIFCLVWCSLQKVFDLDSTGGIVALSLVGAVLILI 491
                                 |...|:..|    :||.::..|......|.:             
pombe   394 ---------------------INLAGVSAF----IVWTAIIFVHFRFRRGWV------------- 420

  Fly   492 CVVIGMQPVSTIELTFKVPLVPFVPCLSV----------------------FANLYLMFQLDLNT 534
                 .|..:..:|.||.||.||...:..                      |.:.|::..|    
pombe   421 -----KQGYALSDLPFKSPLYPFPQLIGFVIGIILTLVQGWTVFKPFAAGDFVDAYILLPL---- 476

  Fly   535 WIRFLIWIVIGYV 547
              .|:||:...::
pombe   477 --FFVIWLSYKFI 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slifNP_649428.1 2A0303 8..557 CDD:273330 116/598 (19%)
agp3NP_588521.1 AA_permease_2 41..499 CDD:459263 112/586 (19%)

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