DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slif and SPCC965.11c

DIOPT Version :9

Sequence 1:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_588521.1 Gene:SPCC965.11c / 2539173 PomBaseID:SPCC965.11c Length:537 Species:Schizosaccharomyces pombe


Alignment Length:598 Identity:116/598 - (19%)
Similarity:198/598 - (33%) Gaps:202/598 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 TEDVNEGESQ-LARVLNLFDLTALGVGSTLGLGVYVLAGQVAFNIAGP-AVTISFLIAAIASAFA 75
            |.|..|..|. :.|.|....::.:.:...:|.||::..|. |.:|.|| .:.:.|.|.:|.....
pombe    29 TVDAAENNSNGIKRGLKTRHVSMMALAGIIGPGVFIGMGS-ALHIGGPVGLIVGFAIVSIVVFGV 92

  Fly    76 GICYAEFAARVPKAGSAYVYSYVT-----IGEFVAFTIGWNLILEYVIGTASVARGLSGYFDSLI 135
            .:...||       .|.:.:::.|     :.......||||.::.::...|:....|:..     
pombe    93 MLSIGEF-------NSLFDFNFNTHAARWVDPAFGAAIGWNYVIVWLTNIAAEYTSLTSI----- 145

  Fly   136 NNNMSKALNESMHIDVDFLGDYPDFLSFGMVLL---------LAAILAFGAKE--SSFLNNIFTT 189
                           :.:.|  |...|:|..|:         :..:..||..|  .:|:..:|.|
pombe   146 ---------------LQYWG--PHVPSYGFFLIFWGFFTCYQMLGVSVFGESEYILAFIKLLFIT 193

  Fly   190 VNLVTIAIVLVAGAMNANVDNWRIPK--KDVPEGFGTGGFM-PFGIAGVMAGAAKCFYGFVGFDC 251
             .....||:..||    .:.:.:.|.  |::|...|.||.: .|..|||.         |.|.:.
pombe   194 -GFYIFAIIYAAG----GIPHHKPPNLFKEMPLAHGFGGIVSAFVYAGVF---------FSGVES 244

  Fly   252 IATTGEEAINPKRNIPLSIVVSLIIIFLSYFGVS-----TVL-----------TMMLPYYKQDKD 300
            ::.|..|:.|||:.|||::..:...|...|||:|     ||.           |:..|......:
pombe   245 VSMTAAESKNPKKAIPLAVRQTFWRILYVYFGISISYGITVAWNDPNLSSGSKTLKSPMTIAIMN 309

  Fly   301 APFPHAFDSVEWYTIKWIVTIGAVFALC-TSLLGAMFPLPRILYAMGKDGI---LFKRLSTVNSY 361
            |.:.||.|.|.          ..:...| :|:...::...|.||.:.|||:   :|||:..    
pombe   310 AGWNHAGDFVN----------AVILITCLSSINSGIYIGSRSLYNLAKDGMAPKIFKRVDK---- 360

  Fly   362 TKTPLLATIVSGIFASIMAMLFNLDQLVDMMSIGTLLAYTIVAICVLVLRYQDEEMTKLVSVKAP 426
            ...|.:|.....:|..:..|.:         |.|.:.||..:                       
pombe   361 RGVPWVAVHSVHLFGFLSIMNY---------STGAVKAYGYI----------------------- 393

  Fly   427 NVFRQFFNGNSFREPNSMTSSITKVGIVVFAIFCLVWCSLQKVFDLDSTGGIVALSLVGAVLILI 491
                                 |...|:..|    :||.::..|......|.:             
pombe   394 ---------------------INLAGVSAF----IVWTAIIFVHFRFRRGWV------------- 420

  Fly   492 CVVIGMQPVSTIELTFKVPLVPFVPCLSV----------------------FANLYLMFQLDLNT 534
                 .|..:..:|.||.||.||...:..                      |.:.|::..|    
pombe   421 -----KQGYALSDLPFKSPLYPFPQLIGFVIGIILTLVQGWTVFKPFAAGDFVDAYILLPL---- 476

  Fly   535 WIRFLIWIVIGYV 547
              .|:||:...::
pombe   477 --FFVIWLSYKFI 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slifNP_649428.1 2A0303 8..557 CDD:273330 116/598 (19%)
AA_permease_C 507..557 CDD:290617 12/63 (19%)
SPCC965.11cNP_588521.1 LysP 1..537 CDD:223903 116/598 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2006
SonicParanoid 1 1.000 - - X81
TreeFam 00.000 Not matched by this tool.
43.940

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