DRSC/TRiP Functional Genomics Resources

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Protein Alignment slif and SPCPB1C11.02

DIOPT Version :9

Sequence 1:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_588425.1 Gene:SPCPB1C11.02 / 2539031 PomBaseID:SPCPB1C11.02 Length:505 Species:Schizosaccharomyces pombe


Alignment Length:595 Identity:128/595 - (21%)
Similarity:229/595 - (38%) Gaps:139/595 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 EGESQLARVLNLFDLTALGVGSTLGLGVYVLAGQVAFNIAGPA-VTISFLIAAIASAFAGICYAE 81
            |||| |.|.|:...:..|..|..:|.|:::..|. :...:||| :.|||.:..::.....:...|
pombe    10 EGES-LHRSLSASQIQMLAFGGIIGTGLFLGIGS-SLAESGPASLLISFSVLGVSVYCTMLALGE 72

  Fly    82 FAARVPKAGS--AYVYSYVTIGEFVAFTIGWNLILEYVIGTASVARGLSGYFDSLI----NNNMS 140
            .:..:|.|||  .||..||  .|.::|::.||..|...|..||.........|..:    .:.:|
pombe    73 MSVYMPVAGSFCTYVGRYV--DEALSFSLTWNYWLNDTIALASHVLATRLVVDFWLIPTEGDPVS 135

  Fly   141 KALN-----ESMHIDVDFLGDYPDFLSFGMVLLLAAILAFGAKESSFLNNIFTTVNLVTIAIVLV 200
            .:|:     |::.|......     ||..::|.:..:..||.     :....:::.:.|:|..:|
pombe   136 ASLSLPPWKEAVRIITPITS-----LSANIILNMLPVGGFGE-----IEYWLSSIKVFTVAAFIV 190

  Fly   201 AGAM-NANVDN---------WRIPKKDVPEGFGTGGFMPFGIAGVMAGAAKCFYGFVGFDCIATT 255
            .|.: |..|:|         |:.|           |....||.||::......:.:.|.:.||.|
pombe   191 NGILCNLGVNNEKKFIGFRYWKDP-----------GAFNNGIIGVISSFVNAAFAYAGTESIALT 244

  Fly   256 GEEAINPKRNIPLSIVVSLIIIFLSYFGVSTVLTMMLPYYKQDKD------APFPHAFDSVEWYT 314
            ..||.:|...:|.:|..:...:.|.|.....|:.:.|||.....|      :||...|..   :.
pombe   245 AGEAKSPITTLPKAIRFTAHRVLLLYIISVLVVGINLPYNTPGLDGDSVRMSPFTFVFKK---FG 306

  Fly   315 IKWIVTIGAVFALCTSLLG---AMFPLPRILYAMGKDGILFKRLSTVNSYTKTPLLATIVSGIFA 376
            :....:|..:..|.::|..   :::...|:||::.|.|...|..|..|.: ..|.|:.:.:...|
pombe   307 VPGAASIMNLVILSSALSAGNHSLYAGTRLLYSLAKSGHAPKVFSKCNKH-GIPWLSVLATSATA 370

  Fly   377 SIMAMLFNLDQ----LVDMMSIGTLLAYTIVAICVLVLRYQDEEMTKLVSVKAPNVFRQFFNGNS 437
            .:..|.....:    |::::::...:::..:|:..|..|       |.:.|:. ...|.:|    
pombe   371 ILCLMSSQAGKTWGFLLNVIAVSNQISWIFIAVSSLRFR-------KALRVQG-KTHRLYF---- 423

  Fly   438 FREPNSMTSSITKVGIVVFAIFCLVWCSLQKVFDLDSTGGIVALSLVGAVLILICVVIGMQPVST 502
               ||                    |..        ..|..:.:.|.|..|.|            
pombe   424 ---PN--------------------WTY--------PVGPYIIILLNGVFLFL------------ 445

  Fly   503 IELTFKVPLVPFVPCLSVFANLYLMFQLDLNTWIRFLIWIVIG-YVIYFCYGMRNSTQISRSRSH 566
              ..:| .|.||  .||:|.:.|:.            |.||:| |:|:..|  :.:..:|.|.:.
pombe   446 --QGYK-SLYPF--RLSLFVSYYME------------IPIVLGLYLIWKIY--KKTKLVSSSEAD 491

  Fly   567 AEVAASALQN 576
            .|....:|::
pombe   492 LETDWKSLED 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slifNP_649428.1 2A0303 8..557 CDD:273330 124/574 (22%)
AA_permease_C 507..557 CDD:290617 15/50 (30%)
SPCPB1C11.02NP_588425.1 2A0310 16..485 CDD:273334 119/570 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto100670
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2006
SonicParanoid 1 1.000 - - X81
TreeFam 00.000 Not matched by this tool.
54.940

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