DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slif and aat-9

DIOPT Version :9

Sequence 1:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_001021788.1 Gene:aat-9 / 190250 WormBaseID:WBGene00000010 Length:541 Species:Caenorhabditis elegans


Alignment Length:625 Identity:115/625 - (18%)
Similarity:228/625 - (36%) Gaps:180/625 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LNLFDLTALGVGSTLGLGVYVLAGQVAFNIA---GPAVTISFLIAAIASAFAGICYAEFAARVPK 88
            :.|:...:..:.:.:|.|:::..|.| ..:|   |.|:.: :|...:.|...||||.|....:..
 Worm    20 MGLWSCMSYVIANIIGAGIFITPGTV-LKLALTNGMALVV-WLGCGLISLIGGICYIELGTSIRD 82

  Fly    89 AGSAYVYSYVTIGEFVAFTIGW-NLILEYVIGTASVARGLSGYFDSLINNNMSKALNESMHIDVD 152
            .|..:.|:.....|.:||:..| .:|:.:....|..|:....|        :...|:...|    
 Worm    83 PGCDFAYNVYVGWEGIAFSFMWVGVIMSFPASAAVQAQTFGQY--------IVAGLSPIWH---- 135

  Fly   153 FLGDYPDF-----LSFGMVLLLAAILAFGAKESSFLNNIFTTV-NLVTIAIVLVAGAMNANVDNW 211
             ||...|.     |.|.::::|..:..:...:.:....||.|: .|:::||::|.|.       |
 Worm   136 -LGSPYDVILERGLGFALIIILTVLNLYAIDKYASKFQIFVTIAKLLSLAIIIVTGF-------W 192

  Fly   212 RIPKKDVPEGFGTGGFMP-----FGIAGVMAGAAKCFYG----FVGFDCIATTGEEAINPKRNIP 267
            .:..|...|.| ...|.|     :.|..:    :..|||    |.|:|.:.....|..||:|.:|
 Worm   193 YLIVKGETEHF-KDAFTPLPNEKYDIGQI----SLAFYGALWSFAGWDILNYGTPEIKNPRRTMP 252

  Fly   268 LSIVVSLIIIFLSYFGVSTVLTMMLPYYKQDKDAPFPHAFDSVEW----YTIKWIVTIGAVFALC 328
            ::::..:..:.|.|..::.....:|........:.....|..:..    |.|.::::|    .|.
 Worm   253 IALLGGISAVTLVYMAMNVSYMTVLDTETLKNSSAVAADFARITLGDFSYAIPFMISI----LLI 313

  Fly   329 TSLLGAMFPLPRILYAMGKDGILFKRLSTVNSYTKTPLLATIVSGIFASIMAMLFNLDQLVDMMS 393
            .:|...:|...|..:|..::|.|...||.:|:.:.:|.            .|:||.|        
 Worm   314 GTLNSNIFCGSRFTHAAAREGHLPTFLSCINAESNSPR------------AALLFQL-------- 358

  Fly   394 IGTLLAYTIVAICVLVLRYQDEEMTKLVSVKAPNVFRQFFNGNSFREPNSMTSSITKV--GIVVF 456
                       ||.:.:.:.|.|                          |:.:.:|.|  |..||
 Worm   359 -----------ICTIAVTFVDTE--------------------------SLITYVTFVMFGQRVF 386

  Fly   457 AIFCLVWCSLQKV-FDLDSTGGIVALSLVGAVLILICVVIGMQPVSTIELTFKVPLVPFVPCLSV 520
            .:..|:|...:.: ...|:    :.:.|:.::|..:             :|..:.:.||:.    
 Worm   387 TMAALLWIRYRNIPVHPDA----IRVPLIFSILFFM-------------ITIALVVTPFIE---- 430

  Fly   521 FANLYLMFQLDLNTWIRFLIWIVIGYVIY-----------FCY------------------GMRN 556
                      |..|.|..:..:::|:::|           |.|                  .:::
 Worm   431 ----------DFTTTIVGVGLVLMGFLLYMIFMKPKQLPGFLYRFNDGITRVTCKILFTTPDLKH 485

  Fly   557 STQISRSRSHAEVAASALQNQGQHVNPGFEPDYKVENGGR 596
            :::|...:|..|:      |:|:.::..|..:..|.|..|
 Worm   486 ASEIETLKSDGEL------NRGETLSSRFHNESVVSNDER 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slifNP_649428.1 2A0303 8..557 CDD:273330 106/584 (18%)
AA_permease_C 507..557 CDD:290617 9/78 (12%)
aat-9NP_001021788.1 2A0308 19..477 CDD:273332 106/575 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165404
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

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