DRSC/TRiP Functional Genomics Resources

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Protein Alignment slif and Y53F4B.12

DIOPT Version :9

Sequence 1:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_001293550.1 Gene:Y53F4B.12 / 190214 WormBaseID:WBGene00013159 Length:762 Species:Caenorhabditis elegans


Alignment Length:777 Identity:134/777 - (17%)
Similarity:267/777 - (34%) Gaps:245/777 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LWKALTRRKTEDVNEGESQLARVLNLFDLTALGVGSTLGLGVYVLAGQVAFNIAGPAVTISFLIA 68
            |.|.|..|:.::.....|:.||.|.:..:.||....::.:.::::.......:|||:..::.:.|
 Worm     5 LQKMLRTRRVDEQFLRHSEWARRLGVPLMVALAGIKSISMMLFIILPFSLTQVAGPSTVLAPIFA 69

  Fly    69 AIASAFAGICYAEFAARVPKAGSAYVYSYVTIGEFVAFTIGWNLILEYVIGTASVARGLSGYFDS 133
            .:...|:....:|.:..:||....|.::|..|||..||.|.|..:::||.......:..:.:|:.
 Worm    70 FLIIFFSAAHLSELSCTMPKNCVQYHFAYAVIGELPAFVIAWISLVDYVAQAGLFCKAWADHFNL 134

  Fly   134 LINNNMSKALN-ESMHIDVDFLGDYPDFLS-----FGMVLLLAAILAFGAKESSFLNNIFTTVNL 192
            |.....:|:|. :....|...|....|.|:     ..:.|||.::...|.          ..|:|
 Worm   135 LFRGLPAKSLTFDVFSTDSMLLSPQVDLLTVLSAIITLCLLLCSLRVVGT----------ICVSL 189

  Fly   193 VTIAIVLVAGA-----MNANVDNWRIPKKDVPEGFGTGGFMPFGIAGVM---AGAAKCFYGFVGF 249
            :.:.:::.|..     .:::.:||.           ...|..||..||:   .....|:.|....
 Worm   190 LAVTLLIAASCTMVAFFHSDPENWI-----------KAEFFHFGYQGVLYAICALCACYTGIEST 243

  Fly   250 DCIATTGEEAINPKRNIP-----LSIVVSLIIIFLSY-FGVSTVLT------------------- 289
            .|:.   ||..||::.|.     |.:|::.|...||. |.:||.:|                   
 Worm   244 SCLL---EETKNPRKRISGVLSFLVLVLTTIFFVLSITFSLSTNVTALSEGIMIPEVFSVINIPA 305

  Fly   290 -------------MMLPYYKQDKDAPFPHAFDSVEWY-----TIKWIVTIGAVFALCTSLLGAMF 336
                         |:.|.......:..|.||.|  :|     .:::::::.:|.||...:|.:..
 Worm   306 AKSSSKHWVRRFPMISPSESATSSSISPSAFRS--YYEQGFIRMRYMLSVCSVCALSGGVLASFL 368

  Fly   337 PLPRILYAMGKDGILFKRLSTVNSYTKTPLLATIVSGIFASIMAMLFNLDQLVDMMSIGTLLAYT 401
            |..|::.|:..|.::.....|   .||:|..|.::..:..::.:|:    |...:::....:|..
 Worm   369 PATRVIAALCHDRLIPYAKDT---STKSPYFAVLLCTVLVALCSMI----QKTMLLNFVIFMAPV 426

  Fly   402 IVAICVLVL---RYQDEEM---------------------------------------------- 417
            .:.|.:|::   .|..|::                                              
 Worm   427 KLVITILLVYLQHYYPEQIGIPEETSNYKSIGKKRTRVHIDDGVSIDDSVSLIPSRHLEDHDDQS 491

  Fly   418 -----------------TKLVSVKA-----------------------------PNV-------- 428
                             ||:.|.:.                             ||:        
 Worm   492 EVSHSTFDTTAFLYMKATKMESERLQKRLEKEQLENEELQPVLAKSVSQYHTMDPNLKKAKKIKK 556

  Fly   429 ----------------------------------FRQFFNGNSFREPNSMTSSIT--KVGIVVFA 457
                                              |...|:.::.|.|:...|..|  :...::| 
 Worm   557 HAHNCVAEQCGAENDDDFNSQEVHLFANEEPELPFFSTFSSSAPRPPSPDVSFATFHRSRRLLF- 620

  Fly   458 IFCLVWCSLQKVFDLDSTGGIVALSL-VGAVLILICVVIGMQPVSTIELTF-KVPLVPFVPCLSV 520
            :||:|.|:........:...:....| :|.||:::...:.:..:.|.:..: |...|...|..|:
 Worm   621 LFCVVTCAFSAFLRNYAVPTVTCWMLSIGFVLVIVVFTVNINRLQTNDYLYKKESKVTLFPTTSL 685

  Fly   521 FANLYLMF-----QLDLNTWIRFLIWIVIGYVIYFCYGMRNSTQISRSRSHAEVAASALQNQ 577
            | .|:::.     .:...|....::..:||.:.||.||.|:|       .|.:.|...::|:
 Worm   686 F-TLFMLLGSFAGSVPTKTLAHLVVIPLIGILAYFLYGYRHS-------KHRKTACLVIENR 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slifNP_649428.1 2A0303 8..557 CDD:273330 128/751 (17%)
AA_permease_C 507..557 CDD:290617 14/55 (25%)
Y53F4B.12NP_001293550.1 2A0303 3..>407 CDD:273330 88/430 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2925
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000131
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.820

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