DRSC/TRiP Functional Genomics Resources

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Protein Alignment slif and aat-3

DIOPT Version :10

Sequence 1:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_001300351.1 Gene:aat-3 / 180557 WormBaseID:WBGene00000004 Length:529 Species:Caenorhabditis elegans


Alignment Length:512 Identity:119/512 - (23%)
Similarity:208/512 - (40%) Gaps:90/512 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DVNEGESQLARVLNLFDLTALGVGSTLGLGVYVLAGQVAFNIAGPAVTISFLIAAIASAFAGI-- 77
            |...|:..|.:.:.||:..::.||..:|.|:::  ..........:|.:|.::..::..||||  
 Worm    56 DEEVGDKGLEKTMTLFNGVSIIVGCIIGSGIFI--SPTGIQAQAGSVGLSLIVWVLSGLFAGIGA 118

  Fly    78 -CYAEFAARVPKAGSAYVYSYVTIGEFVAFTIGWNLILEYVI---GTASVARGLSGYFDSLINNN 138
             ||||....:.|:|..|.|.....|.|:||...|   :|.::   .||::.              
 Worm   119 FCYAELGTLIRKSGGDYAYIMEAFGPFLAFLRLW---IESIVVRPCTATIV-------------- 166

  Fly   139 MSKALNESMHIDVDFLGDYPD---------FLSFGMVLLLAAILAFGAKESSFLNNIFTTVNLVT 194
               ||..::::...|   |||         .::..:::||.|:.....|.:|.:.:.|.......
 Worm   167 ---ALTFAIYMLKPF---YPDCDSPPLSTELIAALLLVLLTAVNCISVKWASKVQDFFFVTKTAA 225

  Fly   195 IAIVLVAGAMNANVDNWRIPKKDVPEGFGTGGFMPFGIAGVMAGAAKCFY----GFVGFDCIATT 255
            :.:::..|..|      .:..|  ||.|.:...:....|..:..|:..||    .:.|::.:...
 Worm   226 LVLIIFTGLWN------MVSGK--PEAFDSFENIFENTAKDLETASLAFYSGLFAYQGWNYLNFI 282

  Fly   256 GEEAINPKRNIPLSIVVSLIIIFLSYFGVSTVL-TMMLPYYKQDKDAPFPHAFDSVEWYTIKWIV 319
            .||..|||||:||||.:|..:..:.|...:..| |.:.|    |:....|............|..
 Worm   283 VEELQNPKRNLPLSIAISCSLCTIIYTLTNVALYTSITP----DEMLASPAVAVLFAEKNYGWFA 343

  Fly   320 TIGAVFALCT---SLLGAMFPLPRILYAMGKDGILFKRLSTVNSYTKTPLLATIVSGIFASIMAM 381
            ....:|..|:   |..|.:....|:.|...::|.:...|:.||..||||:.|.|::|:.:.:..:
 Worm   344 FCMPIFVACSTIGSANGVILTSSRLFYCGAREGQMPNVLTMVNKTTKTPIPAVILTGLLSLLYLL 408

  Fly   382 LF-NLDQLVDMMSIGTLLAYTIVAICVLVLRYQDEEMTKLV-SVKAPNVFRQFF----------- 433
            |. |:..|::.:.:...:|   :...:|.|.|..:.|.... :||||.||...|           
 Worm   409 LSNNIYSLINYIQVSYWIA---IGGAILALFYFRKTMPDAPRAVKAPIVFPIIFFIGCVLLVLVP 470

  Fly   434 -NGNSFREPNSMTSSITKVGIVVFAIFCLVWCSLQKVFDLDSTGGIVALSLVGAVLI 489
             .||.  :..::...|...|:.|:.|| :.|....|..|          ||..:|.|
 Worm   471 VLGNP--KDTAIGILIMLSGVPVYLIF-IAWKGKPKCID----------SLTDSVTI 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slifNP_649428.1 2A0303 8..557 CDD:273330 119/512 (23%)
aat-3NP_001300351.1 2A0308 40..527 CDD:273332 119/512 (23%)

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