DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slif and Slc7a12

DIOPT Version :9

Sequence 1:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_543128.1 Gene:Slc7a12 / 140918 MGIID:2156159 Length:465 Species:Mus musculus


Alignment Length:497 Identity:106/497 - (21%)
Similarity:195/497 - (39%) Gaps:125/497 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 QLARVLNLFDLTALGVGSTLGLGVYVLAGQVAFNIAGPAVTISFLIAA---IASAFAGICYAEFA 83
            ||.|.|.:|.::.:...:|||.|::| ..:.....:...:.:|..|.|   :.|..:.:|.||.|
Mouse     2 QLLRALGVFHVSMILFSATLGTGIFV-TPKAVLKYSSLNIPVSLSIWAGCGLLSIMSALCNAEIA 65

  Fly    84 ARVPKAGSAYVYSYVTIGEFVAFTIGWNLILEYVIGTAS----VARGLSGYFDS------LINNN 138
            ...|.:|::|.:...|:|..|||...|..:..:.:|..:    :|..:...|.|      |....
Mouse    66 TTYPLSGASYYFLKRTLGSSVAFLSLWIKLFAHFLGIGAQCLLIATSVIQCFYSGCPAPELPTKC 130

  Fly   139 MSKALNESMHIDVDFLGDYPDFLSFGMVLLLAAILAFGAKESSFLNNIFTTVN-----LVTIAIV 198
            ::.|:                ..|||:|      .|.|.|..::.|.:.:.:.     |:::.::
Mouse   131 LALAI----------------LWSFGIV------SARGIKTVAWFNTVSSFIKLSVLCLISLTVL 173

  Fly   199 LVAG----------AMNANVDNWRIPKKDVPEGFGTGGFMPFGIAGVMAGA-AKCFYGFVGFDCI 252
            ||.|          |::|.:.|                      |..:|.| .:..|.::|...:
Mouse   174 LVNGKKENVSRFENALDAELPN----------------------ASQIADAILQVSYSYLGSSVL 216

  Fly   253 ATTGEEAINPKRNIPLSIV--VSLIIIF-----LSYFGVSTVLTMMLPYYKQDKDAPFPHAFDS- 309
            .....|...|...||.:::  :|::.:.     :||..|.|...::..              || 
Mouse   217 IVIAGEIKRPTETIPKTLIYGISIVTVLYLLTNISYLAVLTSQEIIFS--------------DSV 267

  Fly   310 -VEWY-----TIKWIVTIGAVFALCTSLLGA----MFPLPRILYAMGKDGILFKRLSTVNSYTKT 364
             |.|.     :|:||    :.|.:...|||:    :....|:.|:..::|......|.:|.: .:
Mouse   268 GVTWMNRVFPSIQWI----SSFLISAFLLGSVSCGIVSASRVFYSASQEGEFPSIYSMLNDH-HS 327

  Fly   365 PLLATIVSGIFASIMAMLFNLDQLVDMMSIGTLLAYTIVAICVLVLRYQDEEMTKLVSVKAPNVF 429
            |.:|.|...|.:|:..:..::..||..:|:|:.....:..|.:|.:|||:.::.:...|..|.:|
Mouse   328 PAVADIQIVILSSVAIISSSIIYLVKYVSLGSFCINLLQMIGLLKIRYQNPDIPRPYKVWLPFIF 392

  Fly   430 RQ-------FFNGNSFREPNSMTSSITKVGIVVFAIFCLVWC 464
            ..       .|.      |...:.||..|..||| :||...|
Mouse   393 GSIALSLFLIFT------PVIQSPSIEHVYQVVF-LFCGFLC 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slifNP_649428.1 2A0303 8..557 CDD:273330 106/497 (21%)
AA_permease_C 507..557 CDD:290617
Slc7a12NP_543128.1 AA_permease_2 7..412 CDD:290254 94/474 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847673
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.