DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slif and zmp:0000001267

DIOPT Version :9

Sequence 1:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster
Sequence 2:XP_021323160.1 Gene:zmp:0000001267 / 100537392 ZFINID:ZDB-GENE-140106-227 Length:470 Species:Danio rerio


Alignment Length:546 Identity:101/546 - (18%)
Similarity:200/546 - (36%) Gaps:116/546 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RKTEDVNEGESQLARVLNLFDLTALGVGSTLGLGVYVLAGQVAFNIAGP--AVTISFLIAAIASA 73
            :.||.:|     |.|.|.|....:|..|..:|.|:: ::.|......|.  |..|.:.:..:...
Zfish     2 KNTEKLN-----LRRELGLASAVSLAAGVMIGSGIF-MSPQFVLVYVGSSGASLIIWAVCGVVCM 60

  Fly    74 FAGICYAEFAARVPKAGSAYVYSYVTIGEFVAFTIGWNLI-----LEYVIGTASVARGLSGYFDS 133
            .....|||....:.::|..|:|.....|..:||.:.:..:     |..:.|:.|.|:.....|  
Zfish    61 CTAFSYAEIGTIIRESGGNYIYILRIYGPCLAFVLSFTTMFLMKPLSIIAGSLSFAKYAVAPF-- 123

  Fly   134 LINNNMSKALNESMHIDVDFLGDYPDFL-----SFGMVLLLAAILAFGAKESSFLNNIFTTVNLV 193
                               :.|..|..|     :...||:::.|.....:.:.....:|....||
Zfish   124 -------------------YPGCTPPILVVKCIAAACVLVISTINVLNVRFAMASQVVFMVAKLV 169

  Fly   194 TIAIVLVAGAMNA------NVDNWRIPKKDVPEGFGTGGFMPFGIAGVMAGAAKCFYGFVGFDCI 252
            .:.|:::.|.:..      ::.|.:....|......|.|...:          :|.:.:.|:..|
Zfish   170 GLMIIVIGGIITVAQGNCESLCNSKSAFADAKLSISTVGMALY----------QCLWSYAGWSNI 224

  Fly   253 ATTGEEAINPKRNIPLSIVVSLIIIFLSYFGVS-TVLTMMLPYYKQDKDAPFPHAFDSVEWYT-- 314
            ....||...|:.|:|.::::::.::.:.|..|: :.|..|.|.......|.      :|.|..  
Zfish   225 NNVIEEVKRPEVNLPRALMIAIPMVTILYLLVNVSYLVAMSPAEMISSSAV------AVTWGNKV 283

  Fly   315 ---IKWIVTIGAVFALCTSLLGAMFPLPRILYAMGKDGILFKRLSTVNSYTKTPLLATIVSGIFA 376
               ..|:::|.|..:...||.|:.|...|:.|...::|.:...|:..:.:..||..|.|.:.:.|
Zfish   284 LGGWGWVMSIAAALSSFGSLNGSFFSGGRVCYVAAREGHMPDILAMAHMHRLTPSPALIFNTVIA 348

  Fly   377 SIMAMLFNLDQLVDMMSIGTLLAYTIVAICVLVLRYQDEEMTKLVSVKAPNVFRQFFNGNSFREP 441
            .|:.:..:...:|:.:|......|.:....:|.|:.:..|:.:.:||                  
Zfish   349 LIVLIPGDFQAIVNFLSFTAWFFYGVTLSGLLYLKIKKPELPRAISV------------------ 395

  Fly   442 NSMTSSITKVGIVVFAIFCLVWCSLQKVFDLDSTGGIVALSLVGAVLILICVVIGMQPVSTIELT 506
                    .:.:.:.|:...|:..|..:.|......:.|:     :.||..:||           
Zfish   396 --------PIILPIVALLAAVFLVLAPIIDDPQIEYLYAV-----IFILSSIVI----------- 436

  Fly   507 FKVPLVPF------VPCLSVFANLYL 526
             .:|.:.|      :..|:||..|:|
Zfish   437 -YIPFIHFKLFPGMLNKLTVFLQLFL 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slifNP_649428.1 2A0303 8..557 CDD:273330 101/546 (18%)
AA_permease_C 507..557 CDD:290617 7/26 (27%)
zmp:0000001267XP_021323160.1 AA_permease_2 5..468 CDD:330980 100/543 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593034
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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