DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slif and slc7a13

DIOPT Version :9

Sequence 1:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster
Sequence 2:XP_002941804.3 Gene:slc7a13 / 100495712 XenbaseID:XB-GENE-995917 Length:489 Species:Xenopus tropicalis


Alignment Length:496 Identity:125/496 - (25%)
Similarity:206/496 - (41%) Gaps:81/496 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LARVLNLFDLTALGVGSTLGLGVYV----LAGQVAFNIAGPAVTISFLIAAIASAFAGICYAEFA 83
            |.|.|..||.|...||..:|.|::|    :......|: |.|:.| :....|......:||||..
 Frog    23 LRRTLGFFDGTCFLVGIIVGAGIFVSPTGVLQYAQLNV-GVALCI-WAACGILVMMGALCYAELG 85

  Fly    84 ARVPKAGSAYVYSYVTIGEFVAFTIGWNLILEYVIGTASVARGLSGYFDSLINNNMSKALNESMH 148
            :.:|.||..|.:....:|.|.||...|.|||  .|..||               |.::||..:.:
 Frog    86 SALPYAGGEYYHVKQALGPFPAFIFIWTLIL--FIRPAS---------------NAARALMFAEY 133

  Fly   149 IDVDFLGDYPDFLSFGMVLLLAAILAFG------AKESSFLNNIFTTVNLVTIAIVLVAGAMNAN 207
            ....|....|.......::.||.:...|      ||.::::.|:||.:.::.:.:::..|.... 
 Frog   134 ATRPFFSGCPTPELLKKIVALAVLWVLGIINTKSAKTTTWVQNVFTVLKMLALILIVTCGLKEL- 197

  Fly   208 VDNWRIPKKDVPEGFGTGGFMP-FGIAGVMAGAAKCFYGFVGFDCIATTGEEAINPKRNIPLSIV 271
                 ..|.::|.........| ...|.:.....:..|.:.|::.:....||..||.:||||..:
 Frog   198 -----AEKTEIPGHLQNAFSSPDLNAAQIAESFFQGLYAYGGWNYLNYIAEEIKNPTKNIPLCTI 257

  Fly   272 --VSLIIIFLSYFGVSTVLTMMLPYYKQDKDAPFPHAFDSVEWY-----TIKWIVTIGAVFALCT 329
              ||::|:|.....:| .||::.|     |:. ...|..||.|.     .:.||:.:....::..
 Frog   258 TAVSVVIVFYLLVNIS-YLTVLTP-----KEI-VSSAAVSVTWADRVIPMVAWIIPVSVAISIFG 315

  Fly   330 SLLGAMFPLPRILYAMGKDGILFKRLSTVNSYTKTPLLATIVSGIFASIMAMLFNLDQLVDMMSI 394
            :|.|.||.|.|:.||..|:|.|...||.::....||..|.|:|.|.|||..:..:|..|.:....
 Frog   316 ALNGGMFMLGRLNYAGSKEGHLPSLLSMLHVNHLTPAPAMILSTIIASIFVIPSDLLSLTNYFGF 380

  Fly   395 GTLLAYTIVAICVLVLRYQDEEMTK-------------LVS--------VKAPNVFRQFFNGNSF 438
            .|.|...:..|.::||||::..:.:             ||:        :::|.|  |:|....|
 Frog   381 STWLLVGLTVISLIVLRYREPNLPRPYKVFLPIAFGVVLVAAFLVLAPIIQSPKV--QYFYALLF 443

  Fly   439 REPNSMTSSITKVGIVVFAI----FCLVWCSLQKVFDLDST 475
                .::|.|.....|.|.:    |..:.|.||.:.::..|
 Frog   444 ----MLSSMIIYFPFVYFKLRVPYFNAITCYLQLLMEVAPT 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slifNP_649428.1 2A0303 8..557 CDD:273330 125/496 (25%)
AA_permease_C 507..557 CDD:290617
slc7a13XP_002941804.3 2A0308 17..477 CDD:273332 124/491 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.