DRSC/TRiP Functional Genomics Resources

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Protein Alignment CYP4F3 and Cyp4d20

DIOPT Version :9

Sequence 1:NP_000887.2 Gene:CYP4F3 / 4051 HGNCID:2646 Length:520 Species:Homo sapiens
Sequence 2:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster


Alignment Length:530 Identity:162/530 - (30%)
Similarity:252/530 - (47%) Gaps:101/530 - (19%)


- Green bases have known domain annotations that are detailed below.


Human    20 LLLLLVGASWLLARILAWTYTFYDNCCRLRCFPQPPKRNWFLGHLGLIHSSEEGLLYTQSLACTF 84
            |..|.:||.    .|:.|....:|...:...|       |.||         |.|:||:.|    
  Fly    46 LQALHLGAE----NIIGWVGEKFDKYGKTFRF-------WILG---------ESLIYTKDL---- 86

Human    85 GDMCCWWVGPWHAIVRIFHPTYIKPVLFAPAAIVPKDKVFYSFLKPWLGDGLLLSAGEKWSRHRR 149
                                .|.:.:| :...::.|.:: |.:|:|:|.||||:|.|.||...|:
  Fly    87 --------------------QYFETIL-SSTTLLEKGQL-YEYLRPFLNDGLLVSTGRKWHARRK 129

Human   150 MLTPAFHFNILKPYMKIFNESVNIMHAKWQLLASEGSARLDMFEHISLMTLDSLQKCVFSFDSHC 214
            :.|.||||.:|:.|::|.:...::|....:.:| :|...:||.:::||..||.:.:.......:.
  Fly   130 IFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKVA-DGKTAVDMLKYVSLAALDVITEAAMGVQVNA 193

Human   215 QEKPS-EYIAAILELSALVTKRHQQILLYIDFLYYLTPDGQ-RFRRA------------------ 259
            |..|. .||.|   |.::|               |:.||.. ||.|.                  
  Fly   194 QNDPDFPYIKA---LKSVV---------------YIQPDRMFRFSRRYNWLFPLAAPLLHRQLLS 240

Human   260 -CRLVHDFTDAVIQERRRTL----------PSQGVDDFLQAKAKSKTLDFIDVLLLSKDEDGKKL 313
             .|::|||||.||.|||.|:          |....|..:.:|::...||    :||....:.:.|
  Fly   241 DIRVMHDFTDKVISERRETVRRAKADGTYRPLSLGDAEIGSKSQMALLD----ILLQSSINNQPL 301

Human   314 SDEDIRAEADTFMFEGHDTTASGLSWVLYHLAKHPEYQERCRQEVQELLKDREPKEIEWDDLAQL 378
            ||.|||.|.|||||||.|||:||:|..||.:|:|||.|:|..:|:|.:|.......:....|..|
  Fly   302 SDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAPVTQAQLQDL 366

Human   379 PFLTMCIKESLRLHPPVPAVSRCCTQDIVLPDGRVIPKGIICLISVFGTHHNPAVWPDPEVYDPF 443
            .:|...|||::||:|||||:.|...:::.:.| :.||......:.::..|.:...:|||..:.|.
  Fly   367 KYLDCVIKETMRLYPPVPAIGRHAQKELEIGD-KTIPANTSIYLVLYYAHRDANYFPDPLSFRPE 430

Human   444 RFDPKNIKERSPLAFIPFSAGPRNCIGQAFAMAEMKVVLGLTLLRFRVLPDHTEPRRKPELVLRA 508
            ||.....:..:..|::||||||:|||||.||:.||||::...|..:.:||...|.:.....:||:
  Fly   431 RFLEDQEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFYELLPLGEELKPMLNFILRS 495

Human   509 EGGLWLRVEP 518
            ..|:.:.:.|
  Fly   496 ASGINVGLRP 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CYP4F3NP_000887.2 p450 52..515 CDD:365848 153/493 (31%)
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 158/516 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165154793
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.750

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