DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ssl1 and SSL1

DIOPT Version :9

Sequence 1:NP_001262227.1 Gene:Ssl1 / 40509 FlyBaseID:FBgn0037202 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_013105.1 Gene:SSL1 / 850691 SGDID:S000003995 Length:461 Species:Saccharomyces cerevisiae


Alignment Length:408 Identity:151/408 - (37%)
Similarity:231/408 - (56%) Gaps:35/408 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 YRWETGYEKTWEAIKDDEDGMLDGAIAEIIQKAKRQRQAQKS-KQNRLGMMRHMFVVLDCSESMS 75
            |.||...:::|:.:|.|::|.:...:|.|:: |:::|.|:|: ...:.|::|.:.:.|||||:|.
Yeast    74 YAWEDEIKRSWDLVKVDDEGDMASLVASIVE-ARKKRTAKKNITPYQRGIIRSLILTLDCSEAML 137

  Fly    76 VPDLKPTRLRCTVKLLELFIEEFFDQNPISQLGLIALKAKRAEKVTELTGTSRVHLKALESLANV 140
            ..||:|.|....::....|:.||||||||||:|:|.::...|:.|::::|..:.|:.||:|:...
Yeast   138 EKDLRPNRHAMIIQYAIDFVHEFFDQNPISQMGIIIMRNGLAQLVSQVSGNPQDHIDALKSIRKQ 202

  Fly   141 SLTSEPSLQNGLDLALKSLKVVPSHASREIVIIMGSLTTCDPVDINLTIDELKKEGIRCSVISLS 205
            .....|||||.|::|...|..||:|.:||::|:.|||:|.||.||:.|||.|..|.||..|:.||
Yeast   203 EPKGNPSLQNALEMARGLLLPVPAHCTREVLIVFGSLSTTDPGDIHQTIDSLVSEKIRVKVLGLS 267

  Fly   206 AEIHVARYLTQQTMGTFG------AVLDDAHFRDQLMSQVDPPPAAKTQHN-SLIRMGFPHTKNE 263
            |::.:.:.|.:.|  .:|      .:||:.|.::.....|.|.|..|.... :|::||||....|
Yeast   268 AQVAICKELCKAT--NYGDESFYKILLDETHLKELFNEAVTPLPVNKINKGFTLVKMGFPTRIFE 330

  Fly   264 VEGKDAPLSMCMCHIENLEEPSELTTTGHHCPQCNSKYCELPVECQSCGLTLVSAPHLARSYHHL 328
                |.| :.|.||       |:|...|:.||.|:||.|.||..|..|.|.|:.:.|||||||||
Yeast   331 ----DTP-TFCSCH-------SKLVYGGYFCPNCHSKVCSLPTVCPCCDLMLILSTHLARSYHHL 383

  Fly   329 FPVPNFEELPFEAMPASSSDLTSDVRECYGCAKAL----GQGVDKVADKVVFRCGFCKQFFCVDC 389
            .|:..|.|:|      ::....|:  :|:.|....    .....|:.....:||..|||.|||||
Yeast   384 MPLKTFAEVP------TTEKFRSE--DCFSCQSRFPILKNHKNGKLLTSSRYRCEDCKQEFCVDC 440

  Fly   390 DIFIHDTLHACVGCNTIP 407
            |:|||:.||.|.||.:.|
Yeast   441 DVFIHEILHNCPGCESKP 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ssl1NP_001262227.1 SSL1 10..407 CDD:227480 150/406 (37%)
Ssl1 67..258 CDD:190848 76/197 (39%)
C1_4 291..403 CDD:297864 47/115 (41%)
SSL1NP_013105.1 SSL1 21..459 CDD:227480 151/408 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343809
Domainoid 1 1.000 142 1.000 Domainoid score I1004
eggNOG 1 0.900 - - E1_COG5151
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1159
Inparanoid 1 1.050 271 1.000 Inparanoid score I596
Isobase 1 0.950 - 0 Normalized mean entropy S943
OMA 1 1.010 - - QHG54264
OrthoFinder 1 1.000 - - FOG0004477
OrthoInspector 1 1.000 - - oto100255
orthoMCL 1 0.900 - - OOG6_102284
Panther 1 1.100 - - LDO PTHR12695
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1505
SonicParanoid 1 1.000 - - X3170
TreeFam 1 0.960 - -
1615.740

Return to query results.
Submit another query.