DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssl1 and GTF2H2C_2

DIOPT Version :9

Sequence 1:NP_001262227.1 Gene:Ssl1 / 40509 FlyBaseID:FBgn0037202 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_001035955.1 Gene:GTF2H2C_2 / 730394 HGNCID:35418 Length:395 Species:Homo sapiens


Alignment Length:410 Identity:207/410 - (50%)
Similarity:278/410 - (67%) Gaps:18/410 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EQEDQKEYRWETGYEKTWEAIKDDEDGMLDGAIAEIIQKAKRQRQAQKSKQNRLGMMRHMFVVLD 69
            ::|.::..|||.|||:|||.:|:||.|.|...|.:|:.||||:|..:...|.|||||||::||:|
Human     2 DEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRHLYVVVD 66

  Fly    70 CSESMSVPDLKPTRLRCTVKLLELFIEEFFDQNPISQLGLIALKAKRAEKVTELTGTSRVHLKAL 134
            .|.:|...||||.||.||:||||.|:||:||||||||:|:|..|:|||||:|||:|..|.|:.:|
Human    67 GSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSGNPRKHITSL 131

  Fly   135 ESLANVSLTSEPSLQNGLDLALKSLKVVPSHASREIVIIMGSLTTCDPVDINLTIDELKKEGIRC 199
            :...:::...||||.|.|.:|:::||.:|.|.|||::||..|||||||.:|...|..||...||.
Human   132 KEAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPSNIYDLIKTLKAAKIRV 196

  Fly   200 SVISLSAEIHVARYLTQQTMGTFGAVLDDAHFRDQLMSQVDPPPAAKTQHNSLIRMGFP-HTKNE 263
            |||.||||:.|...|.::|.||:..:||::|:::.|...:.||||:.:...|||||||| ||...
Human   197 SVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHLSPPPASSSSECSLIRMGFPQHTIAS 261

  Fly   264 VEGKDAPLSMCMCHIENLEEPSELTTTGHHCPQCNSKYCELPVECQSCGLTLVSAPHLARSYHHL 328
            :..:||..|..|.|::...||. ||..|:.||||.:|||||||||:.||||||||||||||||||
Human   262 LSDQDAKPSFSMAHLDGNTEPG-LTLGGYFCPQCRAKYCELPVECKICGLTLVSAPHLARSYHHL 325

  Fly   329 FPVPNFEELPFEAMPASSSDLTSDVRECYGCAKALGQGVDKVADKVVFRCGFCKQFFCVDCDIFI 393
            ||:..|:|:|.|..        :..|.||||     ||  ::.|:.|:.|..|:..||||||:|:
Human   326 FPLDAFQEIPLEEY--------NGERFCYGC-----QG--ELKDQHVYVCAVCQNVFCVDCDVFV 375

  Fly   394 HDTLHACVGC-NTIPGVDGL 412
            ||:||.|.|| :.||...|:
Human   376 HDSLHCCPGCIHKIPAPSGV 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ssl1NP_001262227.1 SSL1 10..407 CDD:227480 203/398 (51%)
Ssl1 67..258 CDD:190848 97/190 (51%)
C1_4 291..403 CDD:297864 61/111 (55%)
GTF2H2C_2NP_001035955.1 Ssl1 64..255 CDD:367789 97/190 (51%)
C1_4 288..388 CDD:352591 63/114 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 203 1.000 Domainoid score I2969
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 415 1.000 Inparanoid score I1841
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54264
OrthoDB 1 1.010 - - D285146at33208
OrthoFinder 1 1.000 - - FOG0004477
OrthoInspector 1 1.000 - - otm42148
orthoMCL 1 0.900 - - OOG6_102284
Panther 1 1.100 - - LDO PTHR12695
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1505
SonicParanoid 1 1.000 - - X3170
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1212.010

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