DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssl1 and gtf2h2

DIOPT Version :9

Sequence 1:NP_001262227.1 Gene:Ssl1 / 40509 FlyBaseID:FBgn0037202 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_001011081.1 Gene:gtf2h2 / 496493 XenbaseID:XB-GENE-1002369 Length:393 Species:Xenopus tropicalis


Alignment Length:413 Identity:206/413 - (49%)
Similarity:270/413 - (65%) Gaps:26/413 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EQEDQKEYRWETGYEKTWEAIKDDEDGMLDGAIAEIIQKAKRQRQAQKSKQNRLGMMRHMFVVLD 69
            ::|.:|..|||.|||:|||.:|:||.|.|...|.||:.|.||:|..:...|.|||||||::|::|
 Frog     2 DEEPEKTKRWEGGYERTWEVLKEDESGSLKSTIDEILFKDKRKRIFENRGQVRLGMMRHLYVIVD 66

  Fly    70 CSESMSVPDLKPTRLRCTVKLLELFIEEFFDQNPISQLGLIALKAKRAEKVTELTGTSRVHLKAL 134
            .|.:|...||||.||.||:||||.|:||:||||||||:|||..:.|||||:|||.|..|.||.||
 Frog    67 SSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGLIVTRNKRAEKLTELAGNPRQHLNAL 131

  Fly   135 ESLANVSLTSEPSLQNGLDLALKSLKVVPSHASREIVIIMGSLTTCDPVDINLTIDELKKEGIRC 199
            :...:::...||||.|.|:|||::||.:|.|.||||::|..|||||||.:|...|..||...||.
 Frog   132 KKAVDMNCNGEPSLYNSLNLALQTLKHMPGHTSREILVIFSSLTTCDPTNIYDIIKCLKASKIRV 196

  Fly   200 SVISLSAEIHVARYLTQQTMGTFGAVLDDAHFRDQLMSQVDPPPAAKTQHNSLIRMGFP-HTKNE 263
            |||.||||:.|...||::|.|.:..:||::|:::.||..|.||||:.|...|||||||| ||...
 Frog   197 SVIGLSAEVRVCTVLTRETGGVYHVILDESHYKELLMHHVIPPPASSTSECSLIRMGFPQHTMGC 261

  Fly   264 VEGKDAPLSMCMCHIENLEEPSELTTTGHHCPQCNSKYCELPVECQSCGLTLVSAPHLARSYHHL 328
            :..:||..|..|.|::|..||. ||..|:.||||.:||.||||||:.|.||||||||||||||||
 Frog   262 LSDQDAKPSFSMAHLDNTSEPG-LTLGGYFCPQCRAKYSELPVECKVCRLTLVSAPHLARSYHHL 325

  Fly   329 FPVPNFEELPFEAMPASSSDLTSDVRECYGCAKALGQGVDKVADKVVFRCGFCKQFFCVDCDIFI 393
            ||:..|:|:..|.....        |.|.||.       .::.|:.|:.|..|:..||::||:||
 Frog   326 FPLDAFKEVSLEEYEGE--------RYCRGCD-------GELKDQQVYICPVCQCVFCIECDLFI 375

  Fly   394 HDTLHACVGCNTIPGVDGLVYQQ 416
            |::||.|.||         ::||
 Frog   376 HESLHCCPGC---------IHQQ 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ssl1NP_001262227.1 SSL1 10..407 CDD:227480 203/397 (51%)
Ssl1 67..258 CDD:190848 103/190 (54%)
C1_4 291..403 CDD:297864 53/111 (48%)
gtf2h2NP_001011081.1 Ssl1 64..255 CDD:367789 103/190 (54%)
C1_4 288..388 CDD:352591 55/123 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 209 1.000 Domainoid score I2797
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1159
Inparanoid 1 1.050 398 1.000 Inparanoid score I1898
OMA 1 1.010 - - QHG54264
OrthoDB 1 1.010 - - D285146at33208
OrthoFinder 1 1.000 - - FOG0004477
OrthoInspector 1 1.000 - - oto105255
Panther 1 1.100 - - LDO PTHR12695
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3170
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1212.080

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