DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssl1 and gtf2h2

DIOPT Version :10

Sequence 1:NP_649427.1 Gene:Ssl1 / 40509 FlyBaseID:FBgn0037202 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_963875.1 Gene:gtf2h2 / 323239 ZFINID:ZDB-GENE-030131-1959 Length:392 Species:Danio rerio


Alignment Length:405 Identity:203/405 - (50%)
Similarity:271/405 - (66%) Gaps:17/405 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EQEDQKEYRWETGYEKTWEAIKDDEDGMLDGAIAEIIQKAKRQRQAQKSKQNRLGMMRHMFVVLD 69
            ::|.::..|||.|||:|||.:|:||.|.|...:.:|:.:|||:|..:...|.|||||||:||::|
Zfish     2 DEEPERTKRWEGGYERTWEVLKEDESGSLKATVEDILFQAKRKRVFESHGQVRLGMMRHLFVIID 66

  Fly    70 CSESMSVPDLKPTRLRCTVKLLELFIEEFFDQNPISQLGLIALKAKRAEKVTELTGTSRVHLKAL 134
            .|.||...||||.||..|:||:|.|:||:||||||||:|:|..|.|||||:|:|.|..:.|:.||
Zfish    67 SSRSMEDQDLKPNRLTSTLKLMEHFVEEYFDQNPISQIGIITTKNKRAEKLTDLAGNPKKHITAL 131

  Fly   135 ESLANVSLTSEPSLQNGLDLALKSLKVVPSHASREIVIIMGSLTTCDPVDINLTIDELKKEGIRC 199
            ....:.:...||||.|.|::||::||.:|:|.|||:::|..|||||||.:|...|..|....||.
Zfish   132 RKAVDSTCVGEPSLYNSLNMALQTLKHMPAHTSREVLVIFSSLTTCDPGNIYELIKTLNGLKIRV 196

  Fly   200 SVISLSAEIHVARYLTQQTMGTFGAVLDDAHFRDQLMSQVDPPPAAKTQHNSLIRMGFP-HTKNE 263
            |||.||||:.|...||::|.|::..:||::||::.|:..|.||||:.:...|||||||| |....
Zfish   197 SVIGLSAEVRVCTILTRETGGSYNVILDESHFKELLLLHVKPPPASSSSECSLIRMGFPQHVIAS 261

  Fly   264 VEGKDAPLSMCMCHIENLEEPSELTTTGHHCPQCNSKYCELPVECQSCGLTLVSAPHLARSYHHL 328
            :..:||..|..|.|:::..|| ||:..|::||||.:||.||||||:.||||||||||||||:|||
Zfish   262 LSDQDAKPSFSMAHLDSSSEP-ELSLGGYYCPQCRAKYTELPVECKVCGLTLVSAPHLARSFHHL 325

  Fly   329 FPVPNFEELPFEAMPASSSDLTSDVRECYGCAKALGQGVDKVADKVVFRCGFCKQFFCVDCDIFI 393
            ||:..|:|.|.|.....        |.|..|     ||  ::.||.||.|..||:.|||:|||||
Zfish   326 FPLEAFQETPLEEYEGE--------RFCEAC-----QG--ELKDKSVFTCLACKKVFCVECDIFI 375

  Fly   394 HDTLHACVGCNTIPG 408
            |||||.|.||..|.|
Zfish   376 HDTLHCCPGCMQIDG 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ssl1NP_649427.1 SSL1 10..407 CDD:227480 200/397 (50%)
gtf2h2NP_963875.1 SSL1 11..385 CDD:227480 197/389 (51%)
vWA_transcription_factor_IIH_type 56..240 CDD:238730 93/183 (51%)

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