DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssl1 and GTF2H2

DIOPT Version :10

Sequence 1:NP_649427.1 Gene:Ssl1 / 40509 FlyBaseID:FBgn0037202 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_001506.1 Gene:GTF2H2 / 2966 HGNCID:4656 Length:395 Species:Homo sapiens


Alignment Length:410 Identity:208/410 - (50%)
Similarity:278/410 - (67%) Gaps:18/410 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EQEDQKEYRWETGYEKTWEAIKDDEDGMLDGAIAEIIQKAKRQRQAQKSKQNRLGMMRHMFVVLD 69
            ::|.::..|||.|||:|||.:|:||.|.|...|.:|:.||||:|..:...|.|||||||::||:|
Human     2 DEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRHLYVVVD 66

  Fly    70 CSESMSVPDLKPTRLRCTVKLLELFIEEFFDQNPISQLGLIALKAKRAEKVTELTGTSRVHLKAL 134
            .|.:|...||||.||.||:||||.|:||:||||||||:|:|..|:|||||:|||:|..|.|:.:|
Human    67 GSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSGNPRKHITSL 131

  Fly   135 ESLANVSLTSEPSLQNGLDLALKSLKVVPSHASREIVIIMGSLTTCDPVDINLTIDELKKEGIRC 199
            :...:::...||||.|.|.:|:::||.:|.|.|||::||..|||||||.:|...|..||...||.
Human   132 KKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSSLTTCDPSNIYDLIKTLKAAKIRV 196

  Fly   200 SVISLSAEIHVARYLTQQTMGTFGAVLDDAHFRDQLMSQVDPPPAAKTQHNSLIRMGFP-HTKNE 263
            |||.||||:.|...|.::|.||:..:||::|:::.|...|.||||:.:...|||||||| ||...
Human   197 SVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPPASSSSECSLIRMGFPQHTIAS 261

  Fly   264 VEGKDAPLSMCMCHIENLEEPSELTTTGHHCPQCNSKYCELPVECQSCGLTLVSAPHLARSYHHL 328
            :..:||..|..|.|::...||. ||..|:.||||.:|||||||||:.||||||||||||||||||
Human   262 LSDQDAKPSFSMAHLDGNTEPG-LTLGGYFCPQCRAKYCELPVECKICGLTLVSAPHLARSYHHL 325

  Fly   329 FPVPNFEELPFEAMPASSSDLTSDVRECYGCAKALGQGVDKVADKVVFRCGFCKQFFCVDCDIFI 393
            ||:..|:|:|.|..        :..|.||||     ||  ::.|:.|:.|..|:..||||||:|:
Human   326 FPLDAFQEIPLEEY--------NGERFCYGC-----QG--ELKDQHVYVCAVCQNVFCVDCDVFV 375

  Fly   394 HDTLHACVGC-NTIPGVDGL 412
            ||:||.|.|| :.||...|:
Human   376 HDSLHCCPGCIHKIPAPSGV 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ssl1NP_649427.1 SSL1 10..407 CDD:227480 204/398 (51%)
GTF2H2NP_001506.1 SSL1 11..385 CDD:227480 201/389 (52%)
vWA_transcription_factor_IIH_type 56..236 CDD:238730 93/179 (52%)

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