DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11109 and NOP2

DIOPT Version :10

Sequence 1:NP_730761.1 Gene:CG11109 / 40507 FlyBaseID:FBgn0037200 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_014338.3 Gene:NOP2 / 855664 SGDID:S000005005 Length:618 Species:Saccharomyces cerevisiae


Alignment Length:249 Identity:89/249 - (35%)
Similarity:128/249 - (51%) Gaps:46/249 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 LLQNLPSIVCVRVLDPQPGERILDMCAAPGNKTSHIAELMGDRGSVVALDNSASRVRSMLPKLGH 274
            :||...|.:.|..|||...||||||.||||.||::|:.:|.:.|.|.|.|.:.||.:|::..:  
Yeast   328 ILQAASSFLPVIALDPHENERILDMAAAPGGKTTYISAMMKNTGCVFANDANKSRTKSLIANI-- 390

  Fly   275 YKSITAHVFNSTEAVAADAPSAPVGEFTGPPFPCESFDRILLDAPCSGLG--NRPQLSCSIKQVK 337
                  |....|..:..:..:....:..|      .||||||||||||.|  .:.|   |:|..:
Yeast   391 ------HRLGCTNTIVCNYDAREFPKVIG------GFDRILLDAPCSGTGVIGKDQ---SVKVSR 440

  Fly   338 VLSSY---PHIQRRLFEQAVQLV----RPGGILVYSTCTVTEDECECLVAWALRKFVELRLTDAT 395
            ....:   ||:|::|...|:..|    :.||::|||||:|..:|.|.::.:||||...::|.|. 
Yeast   441 TEKDFIQIPHLQKQLLLSAIDSVDCNSKHGGVIVYSTCSVAVEEDEAVIDYALRKRPNVKLVDT- 504

  Fly   396 PRWGGPGLPLPGFEACKS----------RLLQRFGPSGANADTVGFFIAKFQKI 439
                  ||.: |.||..|          :|.:|:.|...|.|  |||:||||||
Yeast   505 ------GLAI-GKEAFTSYRGKKFHPSVKLARRYYPHTYNVD--GFFVAKFQKI 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11109NP_730761.1 PUA_NSun6-like 102..195 CDD:409292
RsmB <207..439 CDD:439914 87/247 (35%)
NOP2NP_014338.3 nop2p 273..548 CDD:188051 86/246 (35%)
Blue background indicates that the domain is not in the aligned region.

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