Protein Alignment CG11109 and NCL1

DIOPT Version :10

• Sequence 1: NP_730761.1
• Gene: CG11109 / 40507
• FlyBaseID: FBgn0037200
• Length: 439
• Species: Drosophila melanogaster
• Sequence 2: NP_009529.1
• Gene: NCL1 / 852257
• SGDID: S000000120
• Length: 684
• Species: Saccharomyces cerevisiae
• Alignment Length: 453
• Identity: 112/453 - (24%)
• Similarity: 175/453 - (38%)
• Gaps: 125/453 - (27%)

  Fly    52 DDFRKKLEEKLAIRYGVKSPRIYCLPNLPEMLCIDPLDSQLTKAVADSELKEVVVDTNCGAAL-- 114
            ||.|.:......::...|..:.|      :.|.:.|.|..       .|.|:     .|.|.|
Yeast    19 DDSRAQKNWSELVKENEKWEKYY------KTLALFPEDQW-------EEFKK-----TCQAPLPL 65

  Fly   115 ---LRGAHIYAPGVLAMESNTEREELVNVYADLDGKCKRGTVKRYESPNKVF--LGTGKVLMQRY 174
               :.|:..:|..||.:........|.||  :.:|:..:..|:....|:.:.  |...|.::::.
Yeast    66 TFRITGSRKHAGEVLNLFKERHLPNLTNV--EFEGEKIKAPVELPWYPDHLAWQLDVPKTVIRKN 128

  Fly   175 QLFNNAEKPASGVAVEMQSNVSGVPTLGDLSSEDGLLQNLPSIVCVRVLDPQPGERILDMCAAPG 239
            :.|...::   .:.||        ..:|::|.::. :..:|.|    ||:.:|...:||||||||
Yeast   129 EQFAKTQR---FLVVE--------NAVGNISRQEA-VSMIPPI----VLEVKPHHTVLDMCAAPG 177

  Fly   240 NKTSHIAELM-----GDRGSVVALDNSASRVRSMLPKLGHYKSITAHVFNSTEAVAADAPSAPVG 299
            :||:.:.|.:     ...|.|||.|..|.|...::.:|....|....|.|.      ||...|..
Yeast   178 SKTAQLIEALHKDTDEPSGFVVANDADARRSHMLVHQLKRLNSANLMVVNH------DAQFFPRI 236

  Fly   300 EFTGPPFPCES--------FDRILLDAPCSGLGNRPQLSCSIKQVKVLSSYP-------H-IQRR 348
            ...|     .|        |||||.|.||||.|...      |.|.|...:.       | :|..
Yeast   237 RLHG-----NSNNKNDVLKFDRILCDVPCSGDGTMR------KNVNVWKDWNTQAGLGLHAVQLN 290

  Fly   349 LFEQAVQLVRPGGILVYSTCTVTEDECECLVAWALRKFVE-LRLTDATPRWGGPGLPLPGFEACK 412
            :..:.:.|::..|.||||||::...|.|.:||.||||:.: :||.:...:       |||....|
Yeast   291 ILNRGLHLLKNNGRLVYSTCSLNPIENEAVVAEALRKWGDKIRLVNCDDK-------LPGLIRSK 348

  Fly   413 S---------RLLQR-----------FGPSGANA----------------DTVGFFIAKFQKI 439
            .         .|.::           |.||...|                :|.||||..|:|:
Yeast   349 GVSKWPVYDRNLTEKTKGDEGTLDSFFSPSEEEASKFNLQNCMRVYPHQQNTGGFFITVFEKV 411

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11109	NP_730761.1	PUA_NSun6-like	102..195	CDD:409292	19/99 (19%)
		RsmB	<207..439	CDD:439914	81/289 (28%)
NCL1	NP_009529.1	RsmB	<44..412	CDD:439914	107/422 (25%)