DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11109 and AT4G17590

DIOPT Version :10

Sequence 1:NP_730761.1 Gene:CG11109 / 40507 FlyBaseID:FBgn0037200 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_193494.4 Gene:AT4G17590 / 827478 AraportID:AT4G17590 Length:201 Species:Arabidopsis thaliana


Alignment Length:65 Identity:18/65 - (27%)
Similarity:27/65 - (41%) Gaps:19/65 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 TSHI-----AEL--MGDRGSVVALDNSASRVRSMLPKLGHYKSITAHVFNSTEAVAADAPSAPVG 299
            |.|:     |.|  ||...:||:..|    :.:.|.::.|        .||.:.|..:|||...|
plant    63 TEHLLGSLYANLHRMGITNTVVSNYN----INTKLSRVFH--------INSKDMVLVNAPSTRTG 115

  Fly   300  299
            plant   116  115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11109NP_730761.1 PUA_NSun6-like 102..195 CDD:409292
RsmB <207..439 CDD:439914 18/65 (28%)
AT4G17590NP_193494.4 AdoMet_MTases 38..>141 CDD:473071 18/65 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.