DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11109 and AT3G13180

DIOPT Version :10

Sequence 1:NP_730761.1 Gene:CG11109 / 40507 FlyBaseID:FBgn0037200 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_187924.2 Gene:AT3G13180 / 820508 AraportID:AT3G13180 Length:523 Species:Arabidopsis thaliana


Alignment Length:290 Identity:82/290 - (28%)
Similarity:134/290 - (46%) Gaps:72/290 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 PGVLAMESNTEREELVNVYADLDGKCKRGTVKRYES---PNKVFLGTGKVLMQRYQLFNNAEKPA 184
            || .::.:||.|:   ...|||        |:|..|   |:::.|...:.:           :..
plant   254 PG-FSLRANTGRD---ITRADL--------VERLNSLKVPHELSLHLEEFV-----------RIK 295

  Fly   185 SGVAVEMQSNV--SGVPTLGDLSSEDGLLQNLPSIVCVRVLDPQPGERILDMCAAPGNKTSHIAE 247
            :|:...:|:.:  .|:.::.|.|:  ||:        |.|:.|||||||:|.|||||.||..:|.
plant   296 TGLQTVVQAGLLKEGICSVQDESA--GLI--------VSVVKPQPGERIMDACAAPGGKTLFMAS 350

  Fly   248 LMGDRGSVVALDNSASRVRSMLPKLGHYKSI-----TAH----VFNSTEAVAADAPSAPVGEFTG 303
            .:..:|.:.|:|.:..|:| :|.:......:     |.|    ||..|..|              
plant   351 CLKGQGMIYAMDVNEGRLR-ILGETAKSHQVDGLITTIHSDLRVFAETNEV-------------- 400

  Fly   304 PPFPCESFDRILLDAPCSGLG---NRPQLSCSIKQVKVLSSYPHIQRRLFEQAVQLVRPGGILVY 365
                  .:|::||||||||||   .|..|..: ::::.:.....:|..|.:.|.:||:.||:|||
plant   401 ------QYDKVLLDAPCSGLGVLSKRADLRWN-RKLEDMLELTKLQDELLDSASKLVKHGGVLVY 458

  Fly   366 STCTVTEDECECLVAWALRKFVELRLTDAT 395
            |||::..:|.|..|...|.:..|..:...|
plant   459 STCSIDPEENEGRVEAFLLRHPEFTIDPVT 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11109NP_730761.1 PUA_NSun6-like 102..195 CDD:409292 15/74 (20%)
RsmB <207..439 CDD:439914 64/201 (32%)
AT3G13180NP_187924.2 PRK14902 58..521 CDD:237857 82/290 (28%)

Return to query results.
Submit another query.