DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11109 and Nsun5

DIOPT Version :10

Sequence 1:NP_730761.1 Gene:CG11109 / 40507 FlyBaseID:FBgn0037200 Length:439 Species:Drosophila melanogaster
Sequence 2:XP_038945143.1 Gene:Nsun5 / 288595 RGDID:1309268 Length:510 Species:Rattus norvegicus


Alignment Length:443 Identity:115/443 - (25%)
Similarity:156/443 - (35%) Gaps:159/443 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 ELKEVVVDTNCGAALLRGAHIYAPGVLAMESNTEREEL--VNVYADLDGKCKRGTVKRYESPNKV 162
            :|..:|.:|...:|:| .|.|.:.|:|..|... |..|  |.||..|.||..||...|:      
  Rat    35 QLYALVCETQRYSAVL-DAVIASAGLLRAEKKL-RPHLAKVLVYELLLGKGFRGGGGRW------ 91

  Fly   163 FLGTGKVLMQRYQLFNNAE----KPASGVA------VEMQSNVSGVP------------------ 199
                 |.|:.|:|....||    |...||:      .|.......||                  
  Rat    92 -----KALLGRHQARLKAELARLKVHRGVSRNEDLLQERPGQAHQVPRFVRVNTLKTCPEDAIDY 151

  Fly   200 -------------TLGDLSSEDG--------------------------------LLQNLPSIVC 219
                         :|.||.:..|                                :||:..|.:.
  Rat   152 FKRQGFSYQGRASSLEDLRTLKGQHFLLDPLLPELLVFPAQTDLHEHPLYRAGHLILQDKASCLP 216

  Fly   220 VRVLDPQPGERILDMCAAPGNKTSHIAELMGDRGSVVALDNSASRVRSMLPKLGHYKSITAHVFN 284
            ..:|.|.||..::|.|||||||||:||.|:.::|.:.|.|..|.|:.:|                
  Rat   217 AMLLSPPPGSHVIDACAAPGNKTSYIAALLKNQGKIFAFDQDAKRLAAM---------------- 265

  Fly   285 STEAVAADAPSAPVGE---FTGPPFPCESFDR------ILLDAPCSGLG---------------- 324
            :|....|......|.|   .|..|    |..|      ||||..|||.|                
  Rat   266 ATLLARAGVSCCEVAEKDFLTVSP----SDQRYGQVQYILLDPSCSGSGMLSRQLEEHGEGTPSK 326

  Fly   325 NRPQLSCSIKQVKVLSS--YPHIQRRLFEQAVQLVRPGGILVYSTCTVTEDECECLVAWALRK-F 386
            .|.|.....:|..:..:  :|.:||               ||||||::.::|.|.:|..||:: .
  Rat   327 ERLQALAGFQQRALCHALRFPSLQR---------------LVYSTCSLCQEENEDVVQEALQQNS 376

  Fly   387 VELRLTDATPRWGGPGL-PLPGFEACKSRLLQRFGPSGANADTVGFFIAKFQK 438
            ...||....|.|...|| ..||.|.|     .|..|.  ...|.|||||.|::
  Rat   377 GTFRLAPVLPTWPHRGLSTFPGSEHC-----LRASPE--TTLTGGFFIAVFER 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11109NP_730761.1 PUA_NSun6-like 102..195 CDD:409292 30/104 (29%)
RsmB <207..439 CDD:439914 79/293 (27%)
Nsun5XP_038945143.1 RsmB <136..424 CDD:439914 82/329 (25%)

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