DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11109 and nop2

DIOPT Version :10

Sequence 1:NP_730761.1 Gene:CG11109 / 40507 FlyBaseID:FBgn0037200 Length:439 Species:Drosophila melanogaster
Sequence 2:XP_002941729.1 Gene:nop2 / 100490904 XenbaseID:XB-GENE-962291 Length:749 Species:Xenopus tropicalis


Alignment Length:410 Identity:118/410 - (28%)
Similarity:173/410 - (42%) Gaps:112/410 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 DFRKKLEEKLAIRYGVKSPRIYCLPNLPEMLCIDPLDSQLTKAVADSELKEVVVDTNCGAALLRG 117
            ::.|.|::.||..|....   |.:..|.|:..:             |||    ||      .|..
 Frog   286 EYLKVLKKDLATYYSYGD---YMIETLSELFPV-------------SEL----VD------FLEA 324

  Fly   118 AHIYAPGVLAMESNTER-------EELVNVYADLD--GKCKRGTVKRYESPNKVFLG-TGKVLMQ 172
            ..:..|  :.:.:||.:       :.|:|...:||  ||..:..:..|:|  .|.:| |.:.|..
 Frog   325 CEVQRP--ITIRTNTLKTRRRDLAQALINRSVNLDPLGKWSKTGLVIYDS--SVPIGATPEYLAG 385

  Fly   173 RYQLFNNAEKPASGVAVEMQSNVSGVPTLGDLSSEDGLLQNLPSIVCVRVLDPQPGERILDMCAA 237
            .|                                   :||...|::.|..|.||..||:||||.|
 Frog   386 HY-----------------------------------MLQGASSLLPVIALAPQENERVLDMCCA 415

  Fly   238 PGNKTSHIAELMGDRGSVVALDNSASRVRSMLPKLGHYKSITAHVFNSTEAVAADAPSAPVGEFT 302
            ||.|||::|:||.:.|.|||.|.:|.|:||::..|        |....|..:.::.....:.:..
 Frog   416 PGGKTSYMAQLMKNTGIVVANDMNADRLRSVVGNL--------HRLGVTNCIISNYDGRQISKVL 472

  Fly   303 GPPFPCESFDRILLDAPCSGLG---NRPQLSCSIKQVKVLSSYPHIQRRLFEQAVQLV----RPG 360
            |      .|||:||||||||.|   ..|.:..: |.|:.:....|||:.|...|:..:    :.|
 Frog   473 G------GFDRVLLDAPCSGTGIISKDPAVKTN-KSVQDVQRCAHIQKELILSAIDALDAQSQTG 530

  Fly   361 GILVYSTCTVTEDECECLVAWALRKFVELRLTDATPRWGGPGLPLPGFEACKSRLL-------QR 418
            |.:||.||::|.:|.||:|.:||:|    |.....|.  |......||...|.|..       :|
 Frog   531 GFMVYCTCSITVEENECVVDYALKK----RNVKLVPT--GLDFGKEGFVRFKERRFHPSLRQARR 589

  Fly   419 FGPSGANADTVGFFIAKFQK 438
            |.|...|.|  ||||||.:|
 Frog   590 FYPHTHNMD--GFFIAKLRK 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11109NP_730761.1 PUA_NSun6-like 102..195 CDD:409292 19/102 (19%)
RsmB <207..439 CDD:439914 88/246 (36%)
nop2XP_002941729.1 nop2p 333..607 CDD:188051 102/333 (31%)
valS <613..725 CDD:237855
Blue background indicates that the domain is not in the aligned region.

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