DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and ARFA1D

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_177206.1 Gene:ARFA1D / 843385 AraportID:AT1G70490 Length:181 Species:Arabidopsis thaliana


Alignment Length:177 Identity:158/177 - (89%)
Similarity:166/177 - (93%) Gaps:0/177 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTV 65
            ||..||.||..||.|||||||||||||||||||||||||||||||||||||||||||||||||||
plant     1 MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTV 65

  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDL 130
            ||||||||||||||||||||||||||||||||:|:.|||:||.|||.||||||||||:|||||||
plant    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDL 130

  Fly   131 PNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 177
            |||||||||||||||||||.|:||||:||||||:|||||||||||.:
plant   131 PNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 156/173 (90%)
ARFA1DNP_177206.1 PLN00223 1..181 CDD:165788 158/177 (89%)

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