DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and ARLA1A

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_568553.1 Gene:ARLA1A / 833747 AraportID:AT5G37680 Length:184 Species:Arabidopsis thaliana


Alignment Length:178 Identity:58/178 - (32%)
Similarity:97/178 - (54%) Gaps:7/178 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVETVEYKNISFTVWDVGG 70
            |..:.||.|:||.:.:|||..||||:::..:..|.. ...|||:|||:..|...|::..:||:||
plant     9 NWLRSLFFKQEMELSLVGLQNAGKTSLVNAIATGGYSEDMIPTVGFNMRKVTKGNVTIKIWDLGG 73

  Fly    71 QDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMN 135
            |.:.|.:|..|.:....:::|:|:.||:.:..:|.||..:|.:..|....|||..||.|...|::
plant    74 QRRFRTMWERYCRGVSAIVYVIDAADRDSVPISRSELNDLLTKPSLNGIPLLILGNKIDKSEALS 138

  Fly   136 AAEITDKLGLHSLRNRN---WYIQATCATSGDGLYEGLDWLSNQLKNA 180
            ...:.|:|||.|:.:|.   :.|....:.:.|.:   :|||....:.|
plant   139 KQALVDQLGLESVTDREVCCYMISCKDSINIDAV---IDWLIKHSRTA 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 57/175 (33%)
ARLA1ANP_568553.1 Arl10_like 21..179 CDD:206724 51/160 (32%)

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