DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and ARFB1B

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_197208.1 Gene:ARFB1B / 831569 AraportID:AT5G17060 Length:192 Species:Arabidopsis thaliana


Alignment Length:179 Identity:111/179 - (62%)
Similarity:145/179 - (81%) Gaps:0/179 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTV 65
            ||..|..||...||.:|||::|:||||||||||||||.:||:::|:||||||||.|:|||:.|||
plant     1 MGQAFRKLFDTFFGNQEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVMFTV 65

  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDL 130
            ||||||:|:||||||||.||.|||:||||.||||||:|::|...::.:..:.::::|:||||||:
plant    66 WDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQEIIKDPFMLNSIILVFANKQDM 130

  Fly   131 PNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 179
            ..||:..|:.:.|||..|:||.|:||.|||..||||||||||||:.||:
plant   131 RGAMSPREVCEGLGLFDLKNRKWHIQGTCALRGDGLYEGLDWLSSTLKD 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 108/173 (62%)
ARFB1BNP_197208.1 Arf1_5_like 18..176 CDD:206717 101/157 (64%)

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