DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and SAR2

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_192117.1 Gene:SAR2 / 827368 AraportID:AT4G02080 Length:193 Species:Arabidopsis thaliana


Alignment Length:187 Identity:61/187 - (32%)
Similarity:96/187 - (51%) Gaps:15/187 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDV 68
            |.|:|  ||: :||.:||.:|||.|||||:|:.||...:|...||.....|.:....|.|..:|:
plant    10 VLASL--GLW-QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDL 71

  Fly    69 GGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNA 133
            ||....|.:|:.|:.....::::||:.|:||..|:::||..:|:::.|.....||..||.|:|.|
plant    72 GGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLASVPFLILGNKIDIPYA 136

  Fly   134 MNAAEITDKLGLHSLRNRNWYIQAT-----------CA-TSGDGLYEGLDWLSNQLK 178
            .:..|:...|||.:.......:..|           |: ....|..||..|:|..:|
plant   137 ASEDELRYHLGLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMGYGEGFKWVSQYIK 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 60/186 (32%)
SAR2NP_192117.1 Sar1 2..192 CDD:206645 60/184 (33%)

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